Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.29■□□□□ 0.84
COLCA1Q6ZS62 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
COLCA1Q6ZS62 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
COLCA1Q6ZS62 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COLCA1Q6ZS62 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
COLCA1Q6ZS62 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.28■□□□□ 0.84
COLCA1Q6ZS62 AC135731.1-201ENST00000569415 2548 ntBASIC20.28■□□□□ 0.84
COLCA1Q6ZS62 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COLCA1Q6ZS62 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.28■□□□□ 0.84
COLCA1Q6ZS62 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.28■□□□□ 0.84
COLCA1Q6ZS62 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
COLCA1Q6ZS62 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.28■□□□□ 0.84
COLCA1Q6ZS62 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
COLCA1Q6ZS62 AC012354.3-201ENST00000623734 483 ntBASIC20.28■□□□□ 0.84
COLCA1Q6ZS62 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COLCA1Q6ZS62 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COLCA1Q6ZS62 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
COLCA1Q6ZS62 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
COLCA1Q6ZS62 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
COLCA1Q6ZS62 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.27■□□□□ 0.84
COLCA1Q6ZS62 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
COLCA1Q6ZS62 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
COLCA1Q6ZS62 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.27■□□□□ 0.83
COLCA1Q6ZS62 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.26■□□□□ 0.83
COLCA1Q6ZS62 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.26■□□□□ 0.83
COLCA1Q6ZS62 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COLCA1Q6ZS62 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COLCA1Q6ZS62 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
COLCA1Q6ZS62 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COLCA1Q6ZS62 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.26■□□□□ 0.83
COLCA1Q6ZS62 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COLCA1Q6ZS62 AC074183.2-201ENST00000623112 922 ntBASIC20.26■□□□□ 0.83
COLCA1Q6ZS62 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COLCA1Q6ZS62 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COLCA1Q6ZS62 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
COLCA1Q6ZS62 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COLCA1Q6ZS62 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
COLCA1Q6ZS62 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
COLCA1Q6ZS62 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COLCA1Q6ZS62 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COLCA1Q6ZS62 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
COLCA1Q6ZS62 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.25■□□□□ 0.83
COLCA1Q6ZS62 AC139795.1-202ENST00000500444 432 ntBASIC20.25■□□□□ 0.83
COLCA1Q6ZS62 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.25■□□□□ 0.83
COLCA1Q6ZS62 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COLCA1Q6ZS62 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.25■□□□□ 0.83
COLCA1Q6ZS62 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COLCA1Q6ZS62 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COLCA1Q6ZS62 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COLCA1Q6ZS62 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.24■□□□□ 0.83
COLCA1Q6ZS62 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COLCA1Q6ZS62 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
COLCA1Q6ZS62 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.24■□□□□ 0.83
COLCA1Q6ZS62 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.24■□□□□ 0.83
COLCA1Q6ZS62 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COLCA1Q6ZS62 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COLCA1Q6ZS62 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.24■□□□□ 0.83
COLCA1Q6ZS62 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COLCA1Q6ZS62 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
COLCA1Q6ZS62 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
COLCA1Q6ZS62 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COLCA1Q6ZS62 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COLCA1Q6ZS62 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.23■□□□□ 0.83
COLCA1Q6ZS62 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COLCA1Q6ZS62 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.23■□□□□ 0.83
COLCA1Q6ZS62 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COLCA1Q6ZS62 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
COLCA1Q6ZS62 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COLCA1Q6ZS62 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.22■□□□□ 0.83
COLCA1Q6ZS62 AC090877.2-201ENST00000558441 1738 ntBASIC20.22■□□□□ 0.83
COLCA1Q6ZS62 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COLCA1Q6ZS62 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COLCA1Q6ZS62 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.22■□□□□ 0.83
COLCA1Q6ZS62 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COLCA1Q6ZS62 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COLCA1Q6ZS62 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COLCA1Q6ZS62 AC022616.5-201ENST00000518796 181 ntBASIC20.22■□□□□ 0.83
COLCA1Q6ZS62 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COLCA1Q6ZS62 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COLCA1Q6ZS62 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COLCA1Q6ZS62 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COLCA1Q6ZS62 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.22■□□□□ 0.83
COLCA1Q6ZS62 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COLCA1Q6ZS62 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.21■□□□□ 0.83
COLCA1Q6ZS62 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
COLCA1Q6ZS62 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COLCA1Q6ZS62 AC093323.1-202ENST00000635031 2045 ntBASIC20.2■□□□□ 0.83
COLCA1Q6ZS62 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COLCA1Q6ZS62 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.2■□□□□ 0.82
COLCA1Q6ZS62 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
COLCA1Q6ZS62 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.2■□□□□ 0.82
COLCA1Q6ZS62 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COLCA1Q6ZS62 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COLCA1Q6ZS62 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
COLCA1Q6ZS62 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.2■□□□□ 0.82
COLCA1Q6ZS62 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COLCA1Q6ZS62 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.19■□□□□ 0.82
COLCA1Q6ZS62 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COLCA1Q6ZS62 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
COLCA1Q6ZS62 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms