Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.47■■□□□ 1.19
GABREP78334 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.47■■□□□ 1.19
GABREP78334 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
GABREP78334 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
GABREP78334 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.46■■□□□ 1.19
GABREP78334 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
GABREP78334 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC22.45■■□□□ 1.19
GABREP78334 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.45■■□□□ 1.18
GABREP78334 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.45■■□□□ 1.18
GABREP78334 AC092666.2-201ENST00000613287 246 ntBASIC22.45■■□□□ 1.18
GABREP78334 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
GABREP78334 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.45■■□□□ 1.18
GABREP78334 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
GABREP78334 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
GABREP78334 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
GABREP78334 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
GABREP78334 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
GABREP78334 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
GABREP78334 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
GABREP78334 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
GABREP78334 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
GABREP78334 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.44■■□□□ 1.18
GABREP78334 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.44■■□□□ 1.18
GABREP78334 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
GABREP78334 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.44■■□□□ 1.18
GABREP78334 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.44■■□□□ 1.18
GABREP78334 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
GABREP78334 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
GABREP78334 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
GABREP78334 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
GABREP78334 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.42■■□□□ 1.18
GABREP78334 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.42■■□□□ 1.18
GABREP78334 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.42■■□□□ 1.18
GABREP78334 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
GABREP78334 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
GABREP78334 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.41■■□□□ 1.18
GABREP78334 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
GABREP78334 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
GABREP78334 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
GABREP78334 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
GABREP78334 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
GABREP78334 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.4■■□□□ 1.18
GABREP78334 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
GABREP78334 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
GABREP78334 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
GABREP78334 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
GABREP78334 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
GABREP78334 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
GABREP78334 UNC93B3-201ENST00000308076 687 ntBASIC22.39■■□□□ 1.17
GABREP78334 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
GABREP78334 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
GABREP78334 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
GABREP78334 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
GABREP78334 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC22.38■■□□□ 1.17
GABREP78334 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
GABREP78334 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
GABREP78334 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
GABREP78334 AL136162.1-201ENST00000607711 1078 ntBASIC22.38■■□□□ 1.17
GABREP78334 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
GABREP78334 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.38■■□□□ 1.17
GABREP78334 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.38■■□□□ 1.17
GABREP78334 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
GABREP78334 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
GABREP78334 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.37■■□□□ 1.17
GABREP78334 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.37■■□□□ 1.17
GABREP78334 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
GABREP78334 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
GABREP78334 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
GABREP78334 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
GABREP78334 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.36■■□□□ 1.17
GABREP78334 SNX5-217ENST00000606557 1087 ntBASIC22.36■■□□□ 1.17
GABREP78334 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
GABREP78334 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
GABREP78334 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
GABREP78334 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
GABREP78334 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
GABREP78334 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.35■■□□□ 1.17
GABREP78334 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.35■■□□□ 1.17
GABREP78334 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.35■■□□□ 1.17
GABREP78334 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.35■■□□□ 1.17
GABREP78334 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
GABREP78334 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.35■■□□□ 1.17
GABREP78334 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.35■■□□□ 1.17
GABREP78334 FOXO3B-201ENST00000395675 1928 ntBASIC22.35■■□□□ 1.17
GABREP78334 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
GABREP78334 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.35■■□□□ 1.17
GABREP78334 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
GABREP78334 AC135279.3-201ENST00000610945 1311 ntBASIC22.34■■□□□ 1.17
GABREP78334 AC026271.2-201ENST00000428091 497 ntBASIC22.34■■□□□ 1.17
GABREP78334 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.34■■□□□ 1.17
GABREP78334 MIR6722-201ENST00000617286 78 ntBASIC22.34■■□□□ 1.17
GABREP78334 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.34■■□□□ 1.17
GABREP78334 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.34■■□□□ 1.17
GABREP78334 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
GABREP78334 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
GABREP78334 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
GABREP78334 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
GABREP78334 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
GABREP78334 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.33■■□□□ 1.17
GABREP78334 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.33■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms