Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAB3BP20337 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.47■□□□□ 0.87
RAB3BP20337 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB3BP20337 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RAB3BP20337 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB3BP20337 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
RAB3BP20337 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB3BP20337 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB3BP20337 DUX4L13-201ENST00000554103 1267 ntBASIC20.47■□□□□ 0.87
RAB3BP20337 DUX4L15-201ENST00000611059 1267 ntBASIC20.47■□□□□ 0.87
RAB3BP20337 DUX4L23-201ENST00000615195 1269 ntBASIC20.47■□□□□ 0.87
RAB3BP20337 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RAB3BP20337 DUX4L24-201ENST00000617576 1269 ntBASIC20.47■□□□□ 0.87
RAB3BP20337 LINC01971-201ENST00000617888 1048 ntBASIC20.47■□□□□ 0.87
RAB3BP20337 DUX4L22-201ENST00000618238 1269 ntBASIC20.47■□□□□ 0.87
RAB3BP20337 DUX4L20-201ENST00000619712 1269 ntBASIC20.47■□□□□ 0.87
RAB3BP20337 DUX4L21-201ENST00000622058 1269 ntBASIC20.47■□□□□ 0.87
RAB3BP20337 DUX4L10-201ENST00000622460 1267 ntBASIC20.47■□□□□ 0.87
RAB3BP20337 DUX4L25-201ENST00000624915 1269 ntBASIC20.47■□□□□ 0.87
RAB3BP20337 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RAB3BP20337 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB3BP20337 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
RAB3BP20337 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
RAB3BP20337 MIR6089-201ENST00000616698 64 ntBASIC20.46■□□□□ 0.87
RAB3BP20337 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB3BP20337 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.46■□□□□ 0.87
RAB3BP20337 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RAB3BP20337 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.46■□□□□ 0.87
RAB3BP20337 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RAB3BP20337 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.45■□□□□ 0.87
RAB3BP20337 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.45■□□□□ 0.86
RAB3BP20337 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.45■□□□□ 0.86
RAB3BP20337 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB3BP20337 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.45■□□□□ 0.86
RAB3BP20337 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.45■□□□□ 0.86
RAB3BP20337 C9orf163-202ENST00000624034 2573 ntBASIC20.45■□□□□ 0.86
RAB3BP20337 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RAB3BP20337 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RAB3BP20337 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB3BP20337 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RAB3BP20337 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB3BP20337 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.44■□□□□ 0.86
RAB3BP20337 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB3BP20337 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RAB3BP20337 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RAB3BP20337 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB3BP20337 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
RAB3BP20337 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.43■□□□□ 0.86
RAB3BP20337 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAB3BP20337 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB3BP20337 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RAB3BP20337 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB3BP20337 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB3BP20337 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
RAB3BP20337 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.43■□□□□ 0.86
RAB3BP20337 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RAB3BP20337 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAB3BP20337 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RAB3BP20337 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB3BP20337 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAB3BP20337 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RAB3BP20337 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAB3BP20337 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB3BP20337 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.42■□□□□ 0.86
RAB3BP20337 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB3BP20337 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.42■□□□□ 0.86
RAB3BP20337 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAB3BP20337 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAB3BP20337 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB3BP20337 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB3BP20337 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
RAB3BP20337 HLA-V-202ENST00000446817 847 ntBASIC20.41■□□□□ 0.86
RAB3BP20337 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.41■□□□□ 0.86
RAB3BP20337 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAB3BP20337 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.41■□□□□ 0.86
RAB3BP20337 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RAB3BP20337 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RAB3BP20337 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB3BP20337 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB3BP20337 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.41■□□□□ 0.86
RAB3BP20337 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB3BP20337 CLDN5-201ENST00000403084 2357 ntBASIC20.41■□□□□ 0.86
RAB3BP20337 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB3BP20337 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB3BP20337 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB3BP20337 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
RAB3BP20337 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RAB3BP20337 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB3BP20337 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RAB3BP20337 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RAB3BP20337 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
RAB3BP20337 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.39■□□□□ 0.86
RAB3BP20337 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.39■□□□□ 0.85
RAB3BP20337 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
RAB3BP20337 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RAB3BP20337 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
RAB3BP20337 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
RAB3BP20337 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.38■□□□□ 0.85
RAB3BP20337 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB3BP20337 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms