Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC21.58■■□□□ 1.046e-7■■■■□ 20.4
XRCC6P12956 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.956e-7■■■■□ 20.4
XRCC6P12956 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC20.93■□□□□ 0.946e-7■■■■□ 20.4
XRCC6P12956 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.9■□□□□ 0.946e-7■■■■□ 20.4
XRCC6P12956 LMNA-211ENST00000470199 551 ntTSL 419.9■□□□□ 0.786e-7■■■■□ 20.4
XRCC6P12956 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC19.8■□□□□ 0.766e-7■■■■□ 20.4
XRCC6P12956 NPRL3-214ENST00000622194 2981 ntTSL 519.62■□□□□ 0.736e-7■■■■□ 20.4
XRCC6P12956 NPRL3-213ENST00000621703 2812 ntTSL 1 (best)19.43■□□□□ 0.76e-7■■■■□ 20.4
XRCC6P12956 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC19.28■□□□□ 0.686e-7■■■■□ 20.4
XRCC6P12956 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.97■□□□□ 0.636e-7■■■■□ 20.4
XRCC6P12956 LMNA-219ENST00000502751 570 ntTSL 418.31■□□□□ 0.526e-7■■■■□ 20.4
XRCC6P12956 WDR6-216ENST00000489684 1155 ntTSL 218.22■□□□□ 0.516e-7■■■■□ 20.4
XRCC6P12956 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.476e-7■■■■□ 20.4
XRCC6P12956 WDR6-211ENST00000471162 3565 ntTSL 1 (best)16.28■□□□□ 0.26e-7■■■■□ 20.4
XRCC6P12956 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.99■□□□□ 0.156e-7■■■■□ 20.4
XRCC6P12956 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC15.93■□□□□ 0.146e-7■■■■□ 20.4
XRCC6P12956 WDR6-204ENST00000420783 3656 ntTSL 1 (best)15.44■□□□□ 0.066e-7■■■■□ 20.4
XRCC6P12956 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC15.34■□□□□ 0.056e-7■■■■□ 20.4
XRCC6P12956 LMNA-210ENST00000469565 591 ntTSL 415.2■□□□□ 0.026e-7■■■■□ 20.4
XRCC6P12956 LMNA-206ENST00000368300 3190 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.036e-7■■■■□ 20.4
XRCC6P12956 NPRL3-206ENST00000464069 551 ntTSL 214.64□□□□□ -0.076e-7■■■■□ 20.4
XRCC6P12956 WDR6-207ENST00000448293 3377 ntTSL 2 BASIC14.5□□□□□ -0.096e-7■■■■□ 20.4
XRCC6P12956 WDR6-208ENST00000452875 3916 ntTSL 1 (best)14.07□□□□□ -0.166e-7■■■■□ 20.4
XRCC6P12956 WDR6-220ENST00000608424 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.266e-7■■■■□ 20.4
XRCC6P12956 WDR6-221ENST00000610967 4259 ntTSL 1 (best) BASIC13.14□□□□□ -0.316e-7■■■■□ 20.4
XRCC6P12956 NPRL3-208ENST00000473674 855 ntTSL 311.84□□□□□ -0.516e-7■■■■□ 20.4
XRCC6P12956 PPIE-212ENST00000482751 2564 ntTSL 211.1□□□□□ -0.636e-7■■■■□ 20.4
XRCC6P12956 PPIE-210ENST00000475350 1213 ntTSL 210.77□□□□□ -0.696e-7■■■■□ 20.4
XRCC6P12956 PPIE-204ENST00000372835 842 ntTSL 310.52□□□□□ -0.736e-7■■■■□ 20.4
XRCC6P12956 PPIE-201ENST00000324379 1277 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.736e-7■■■■□ 20.4
XRCC6P12956 PPIE-214ENST00000495526 4651 ntTSL 1 (best)9.24□□□□□ -0.936e-7■■■■□ 20.4
XRCC6P12956 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC15.26■□□□□ 0.031e-6■■■■□ 20.3
XRCC6P12956 REPIN1-206ENST00000469309 910 ntTSL 227.41■■□□□ 1.986e-6■■■■□ 20.3
XRCC6P12956 REPIN1-219ENST00000522266 480 ntTSL 226.28■■□□□ 1.86e-6■■■■□ 20.3
XRCC6P12956 REPIN1-207ENST00000473391 1064 ntTSL 222.2■■□□□ 1.146e-6■■■■□ 20.3
XRCC6P12956 REPIN1-216ENST00000518462 621 ntTSL 420.16■□□□□ 0.826e-6■■■■□ 20.3
XRCC6P12956 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.61■□□□□ 0.736e-6■■■■□ 20.3
XRCC6P12956 BOD1L1-201ENST00000040738 10565 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.491e-6■■■■□ 20.2
XRCC6P12956 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.67■□□□□ 0.91e-6■■■■□ 20.2
XRCC6P12956 DCTN5-202ENST00000563188 547 ntTSL 519.26■□□□□ 0.671e-6■■■■□ 20.2
XRCC6P12956 DCTN5-205ENST00000566053 571 ntTSL 49.04□□□□□ -0.961e-6■■■■□ 20.2
XRCC6P12956 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC8.91□□□□□ -0.981e-6■■■■□ 20.2
XRCC6P12956 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.291e-6■■■■□ 20.2
XRCC6P12956 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC6.21□□□□□ -1.421e-6■■■■□ 20.2
XRCC6P12956 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC7.12□□□□□ -1.273e-7■■■■□ 20.2
XRCC6P12956 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC18.03■□□□□ 0.482e-6■■■■□ 20.1
XRCC6P12956 GPC3-201ENST00000370818 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.132e-6■■■■□ 20.1
XRCC6P12956 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC9.88□□□□□ -0.832e-6■■■■□ 20.1
XRCC6P12956 SNORD11-201ENST00000459124 84 ntBASIC2□□□□□ -2.095e-9■■■■□ 20.1
XRCC6P12956 YBX1-203ENST00000436427 1524 ntTSL 1 (best)23.79■■□□□ 1.41e-9■■■■□ 19.9
XRCC6P12956 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.371e-9■■■■□ 19.9
XRCC6P12956 YBX1-202ENST00000332220 776 ntTSL 523.37■■□□□ 1.331e-9■■■■□ 19.9
XRCC6P12956 YBX1-204ENST00000467957 770 ntTSL 220.85■□□□□ 0.931e-9■■■■□ 19.9
XRCC6P12956 RBM14-RBM4-202ENST00000421355 2034 ntTSL 222.91■■□□□ 1.261e-6■■■■□ 19.8
XRCC6P12956 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.181e-6■■■■□ 19.8
XRCC6P12956 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.11■□□□□ 0.811e-6■■■■□ 19.8
XRCC6P12956 RBM14-RBM4-204ENST00000511114 523 ntTSL 413.78□□□□□ -0.21e-6■■■■□ 19.8
XRCC6P12956 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.924e-6■■■■□ 19.8
XRCC6P12956 HNRNPA2B1-203ENST00000360787 1724 ntTSL 518.31■□□□□ 0.522e-12■■■■□ 19.8
XRCC6P12956 HNRNPA2B1-206ENST00000490912 5328 ntTSL 216.98■□□□□ 0.312e-12■■■■□ 19.8
XRCC6P12956 HNRNPA2B1-204ENST00000463181 6284 ntTSL 216■□□□□ 0.152e-12■■■■□ 19.8
XRCC6P12956 HNRNPA2B1-208ENST00000618183 3539 ntTSL 5 BASIC13.48□□□□□ -0.252e-12■■■■□ 19.8
XRCC6P12956 HNRNPA2B1-202ENST00000356674 1711 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.312e-12■■■■□ 19.8
XRCC6P12956 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.882e-12■■■■□ 19.8
XRCC6P12956 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC17.05■□□□□ 0.321e-6■■■■□ 19.8
XRCC6P12956 GGA3-220ENST00000613421 5156 ntTSL 216.06■□□□□ 0.161e-6■■■■□ 19.8
XRCC6P12956 GGA3-205ENST00000578348 2251 ntTSL 2 BASIC14.21□□□□□ -0.131e-6■■■■□ 19.8
XRCC6P12956 GGA3-213ENST00000582486 2319 ntTSL 5 BASIC12.99□□□□□ -0.331e-6■■■■□ 19.8
XRCC6P12956 GGA3-201ENST00000537686 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.561e-6■■■■□ 19.8
XRCC6P12956 GGA3-222ENST00000621217 4181 ntTSL 210.88□□□□□ -0.671e-6■■■■□ 19.8
XRCC6P12956 GGA3-223ENST00000621870 4034 ntTSL 1 (best)10.36□□□□□ -0.751e-6■■■■□ 19.8
XRCC6P12956 GGA3-202ENST00000538886 3766 ntTSL 1 (best) BASIC10.32□□□□□ -0.761e-6■■■■□ 19.8
XRCC6P12956 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.439e-10■■■■□ 19.8
XRCC6P12956 HECTD1-213ENST00000556224 3267 ntTSL 517.29■□□□□ 0.369e-10■■■■□ 19.8
XRCC6P12956 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC15.87■□□□□ 0.139e-10■■■■□ 19.8
XRCC6P12956 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.079e-10■■■■□ 19.8
XRCC6P12956 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC27.19■■□□□ 1.943e-6■■■■□ 19.8
XRCC6P12956 AC004980.1-202ENST00000450661 962 ntTSL 1 (best)26.6■■□□□ 1.853e-6■■■■□ 19.8
XRCC6P12956 AC004980.1-203ENST00000423084 748 ntTSL 325.3■■□□□ 1.643e-6■■■■□ 19.8
XRCC6P12956 PRPF6-201ENST00000266079 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.123e-6■■■■□ 19.7
XRCC6P12956 AL049796.1-201ENST00000565336 1766 ntBASIC24.26■■□□□ 1.472e-41■■■■□ 19.6
XRCC6P12956 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.644e-6■■■■□ 19.6
XRCC6P12956 TNK2-216ENST00000468819 876 ntTSL 1 (best)22.91■■□□□ 1.264e-6■■■■□ 19.6
XRCC6P12956 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.022e-7■■■■□ 19.6
XRCC6P12956 CMIP-203ENST00000539778 3937 ntTSL 1 (best) BASIC15.02■□□□□ -01e-10■■■■□ 19.6
XRCC6P12956 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC29.57■■■□□ 2.321e-7■■■■□ 19.5
XRCC6P12956 AKAP8L-203ENST00000594594 2251 ntTSL 528.66■■■□□ 2.181e-7■■■■□ 19.5
XRCC6P12956 GSE1-216ENST00000637419 2683 ntTSL 525.35■■□□□ 1.651e-7■■■■□ 19.5
XRCC6P12956 NFATC3-209ENST00000561714 792 ntTSL 324.85■■□□□ 1.571e-7■■■■□ 19.5
XRCC6P12956 GSE1-204ENST00000411612 872 ntTSL 524.4■■□□□ 1.51e-7■■■■□ 19.5
XRCC6P12956 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.351e-7■■■■□ 19.5
XRCC6P12956 NFATC3-210ENST00000562171 707 ntTSL 323.39■■□□□ 1.331e-7■■■■□ 19.5
XRCC6P12956 ATG2A-204ENST00000461701 2031 ntTSL 223.33■■□□□ 1.321e-7■■■■□ 19.5
XRCC6P12956 AKAP8L-220ENST00000609519 2113 ntTSL 223.24■■□□□ 1.311e-7■■■■□ 19.5
XRCC6P12956 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.241e-7■■■■□ 19.5
XRCC6P12956 NFATC3-219ENST00000568466 737 ntTSL 222.79■■□□□ 1.241e-7■■■■□ 19.5
XRCC6P12956 AKAP8L-216ENST00000599488 514 ntTSL 422.51■■□□□ 1.191e-7■■■■□ 19.5
XRCC6P12956 AKAP8L-202ENST00000593845 2749 ntTSL 222.32■■□□□ 1.161e-7■■■■□ 19.5
XRCC6P12956 RAD51D-213ENST00000587977 1732 ntTSL 222.03■■□□□ 1.121e-7■■■■□ 19.5
XRCC6P12956 NFATC3-206ENST00000539828 2484 ntTSL 220.99■□□□□ 0.951e-7■■■■□ 19.5
Retrieved 100 of 6,788 protein–RNA pairs in 103.1 ms