RNA–Protein interactions for RNA: ENST00000622194.4

NPRL3-214, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 5

Gene NPRL3, Length 2,981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-214ENST00000622194 NISCHQ9Y2I1 1504 aa33.67■■■□□ 2.98
NPRL3-214ENST00000622194 SHROOM4Q9ULL8 1493 aa29.01■■■□□ 2.23
NPRL3-214ENST00000622194 DCAF8L2P0C7V8 631 aa28.64■■■□□ 2.17
NPRL3-214ENST00000622194 CCDC180Q9P1Z9 1646 aa28.53■■■□□ 2.16
NPRL3-214ENST00000622194 ZCCHC6Q5VYS8 1495 aaKnown RBP28.37■■■□□ 2.13
NPRL3-214ENST00000622194 SUPT5HO00267 1087 aaKnown RBP28.35■■■□□ 2.13
NPRL3-214ENST00000622194 DCAF1Q9Y4B6 1507 aa27.4■■□□□ 1.98
NPRL3-214ENST00000622194 CHIC1Q5VXU3 224 aa27.19■■□□□ 1.94
NPRL3-214ENST00000622194 ABCC9O60706 1549 aa27.13■■□□□ 1.93
NPRL3-214ENST00000622194 SCRIBQ14160 1630 aa27.06■■□□□ 1.92
NPRL3-214ENST00000622194 MYO15BQ96JP2 1530 aa26.97■■□□□ 1.91
NPRL3-214ENST00000622194 RSF1Q96T23 1441 aaPredicted RBP26.63■■□□□ 1.85
NPRL3-214ENST00000622194 LOC105371045A0A1W2PR82 267 aa26.58■■□□□ 1.84
NPRL3-214ENST00000622194 NACADO15069 1562 aa26.55■■□□□ 1.84
NPRL3-214ENST00000622194 CECR2Q9BXF3 1484 aa26.44■■□□□ 1.82
NPRL3-214ENST00000622194 RB1CC1Q8TDY2 1594 aa26.32■■□□□ 1.8
NPRL3-214ENST00000622194 TRIM41Q8WV44 630 aa26.3■■□□□ 1.8
NPRL3-214ENST00000622194 FAM9AQ8IZU1 332 aaPredicted RBP26.29■■□□□ 1.8
NPRL3-214ENST00000622194 PCGF6Q9BYE7 350 aa26.29■■□□□ 1.8
NPRL3-214ENST00000622194 EHMT2Q96KQ7 1210 aa26.26■■□□□ 1.79
NPRL3-214ENST00000622194 MROH2BQ7Z745 1585 aa26.25■■□□□ 1.79
NPRL3-214ENST00000622194 WIZO95785 1651 aa26.1■■□□□ 1.77
NPRL3-214ENST00000622194 PABPN1Q86U42 306 aaKnown RBP eCLIP26.06■■□□□ 1.76
NPRL3-214ENST00000622194 HRCP23327 699 aa25.88■■□□□ 1.73
NPRL3-214ENST00000622194 BAZ1AQ9NRL2 1556 aaPredicted RBP25.86■■□□□ 1.73
NPRL3-214ENST00000622194 UNC13AQ9UPW8 1703 aa25.78■■□□□ 1.72
NPRL3-214ENST00000622194 SMARCA4P51532 1647 aa25.67■■□□□ 1.7
NPRL3-214ENST00000622194 PPARGC1BQ86YN6 1023 aaKnown RBP25.65■■□□□ 1.7
NPRL3-214ENST00000622194 TRIM26Q12899 539 aaPredicted RBP25.64■■□□□ 1.7
NPRL3-214ENST00000622194 CCDC88BA6NC98 1476 aa25.58■■□□□ 1.69
NPRL3-214ENST00000622194 TOP2AP11388 1531 aaKnown RBP25.56■■□□□ 1.68
NPRL3-214ENST00000622194 ABCC8Q09428 1581 aa25.52■■□□□ 1.68
NPRL3-214ENST00000622194 BICRAQ9NZM4 1560 aa25.52■■□□□ 1.68
NPRL3-214ENST00000622194 SMARCA2P51531 1590 aa25.45■■□□□ 1.66
NPRL3-214ENST00000622194 EIF4G1Q04637 1599 aaKnown RBP25.39■■□□□ 1.65
NPRL3-214ENST00000622194 TTBK1Q5TCY1 1321 aaPredicted RBP25.3■■□□□ 1.64
NPRL3-214ENST00000622194 SOGA1O94964 1423 aa25.25■■□□□ 1.63
NPRL3-214ENST00000622194 UBTFP17480 764 aaKnown RBP25.17■■□□□ 1.62
NPRL3-214ENST00000622194 RUSC2Q8N2Y8 1516 aa25.15■■□□□ 1.62
NPRL3-214ENST00000622194 ATAD2BQ9ULI0 1458 aa25.15■■□□□ 1.62
NPRL3-214ENST00000622194 BAZ1BQ9UIG0 1483 aaKnown RBP25.12■■□□□ 1.61
NPRL3-214ENST00000622194 CSRNP3Q8WYN3 585 aa25.11■■□□□ 1.61
NPRL3-214ENST00000622194 WRNQ14191 1432 aaPredicted RBP eCLIP25.06■■□□□ 1.6
NPRL3-214ENST00000622194 PEG3Q9GZU2 1588 aa25.03■■□□□ 1.6
NPRL3-214ENST00000622194 RANGAP1P46060 587 aaPredicted RBP24.99■■□□□ 1.59
NPRL3-214ENST00000622194 CEP162Q5TB80 1403 aa24.96■■□□□ 1.59
NPRL3-214ENST00000622194 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.89■■□□□ 1.57
NPRL3-214ENST00000622194 SYNJ1O43426 1573 aa24.89■■□□□ 1.57
NPRL3-214ENST00000622194 ZEB1P37275 1124 aaPredicted RBP24.86■■□□□ 1.57
NPRL3-214ENST00000622194 TNIKQ9UKE5 1360 aa24.85■■□□□ 1.57
NPRL3-214ENST00000622194 EEA1Q15075 1411 aa24.83■■□□□ 1.57
NPRL3-214ENST00000622194 CCER1Q8TC90 406 aaPredicted RBP24.77■■□□□ 1.56
NPRL3-214ENST00000622194 GOLGA3Q08378 1498 aa24.77■■□□□ 1.56
NPRL3-214ENST00000622194 CEP164Q9UPV0 1460 aa24.64■■□□□ 1.53
NPRL3-214ENST00000622194 NCAPD3P42695 1498 aa24.63■■□□□ 1.53
NPRL3-214ENST00000622194 RAPGEF2Q9Y4G8 1499 aa24.61■■□□□ 1.53
NPRL3-214ENST00000622194 CLIP1P30622 1438 aa24.57■■□□□ 1.52
NPRL3-214ENST00000622194 HMGXB3Q12766 1538 aa24.52■■□□□ 1.52
NPRL3-214ENST00000622194 APLP2Q06481 763 aa24.51■■□□□ 1.51
NPRL3-214ENST00000622194 TOP2BQ02880 1626 aa24.51■■□□□ 1.51
NPRL3-214ENST00000622194 HNRNPUL2Q1KMD3 747 aaKnown RBP24.5■■□□□ 1.51
NPRL3-214ENST00000622194 KIF21BO75037 1637 aa24.47■■□□□ 1.51
NPRL3-214ENST00000622194 CUX1P39880 1505 aa24.43■■□□□ 1.5
NPRL3-214ENST00000622194 CFTRP13569 1480 aa24.39■■□□□ 1.5
NPRL3-214ENST00000622194 BIVM-ERCC5R4GMW8 1640 aa24.35■■□□□ 1.49
NPRL3-214ENST00000622194 VPS8Q8N3P4 1428 aa24.34■■□□□ 1.49
NPRL3-214ENST00000622194 KIF27Q86VH2 1401 aa24.3■■□□□ 1.48
NPRL3-214ENST00000622194 CADPSQ9ULU8 1353 aa24.26■■□□□ 1.47
NPRL3-214ENST00000622194 PRXQ9BXM0 1461 aa24.24■■□□□ 1.47
NPRL3-214ENST00000622194 CC2D2AQ9P2K1 1620 aa24.24■■□□□ 1.47
NPRL3-214ENST00000622194 CUX2O14529 1486 aa24.2■■□□□ 1.46
NPRL3-214ENST00000622194 KANK4Q5T7N3 995 aaPredicted RBP24.17■■□□□ 1.46
NPRL3-214ENST00000622194 ERICH3Q5RHP9 1530 aa24.13■■□□□ 1.45
NPRL3-214ENST00000622194 ARAP1Q96P48 1450 aa24.11■■□□□ 1.45
NPRL3-214ENST00000622194 FGD5Q6ZNL6 1462 aa24.09■■□□□ 1.45
NPRL3-214ENST00000622194 IGF1RP08069 1367 aa24.08■■□□□ 1.45
NPRL3-214ENST00000622194 P3H3Q8IVL6 736 aa24.08■■□□□ 1.45
NPRL3-214ENST00000622194 NESP48681 1621 aa24.06■■□□□ 1.44
NPRL3-214ENST00000622194 ITGAEP38570 1179 aa24.06■■□□□ 1.44
NPRL3-214ENST00000622194 ATP1B4Q9UN42 357 aaPredicted RBP24.05■■□□□ 1.44
NPRL3-214ENST00000622194 DIEXFQ68CQ4 756 aaKnown RBP24.05■■□□□ 1.44
NPRL3-214ENST00000622194 FANCD2Q9BXW9 1451 aa24.04■■□□□ 1.44
NPRL3-214ENST00000622194 DNAJC5BQ9UF47 199 aa24.03■■□□□ 1.44
NPRL3-214ENST00000622194 CARMIL1Q5VZK9 1371 aa24.02■■□□□ 1.44
NPRL3-214ENST00000622194 ARHGAP35Q9NRY4 1499 aa23.97■■□□□ 1.43
NPRL3-214ENST00000622194 RAD54L2Q9Y4B4 1467 aa23.97■■□□□ 1.43
NPRL3-214ENST00000622194 PRDM2Q13029 1718 aa23.95■■□□□ 1.43
NPRL3-214ENST00000622194 ZNF316A6NFI3 1004 aaPredicted RBP23.88■■□□□ 1.41
NPRL3-214ENST00000622194 POLA1P09884 1462 aaPredicted RBP23.81■■□□□ 1.4
NPRL3-214ENST00000622194 TOPBP1Q92547 1522 aa23.81■■□□□ 1.4
NPRL3-214ENST00000622194 TDRD9Q8NDG6 1382 aaKnown RBP23.77■■□□□ 1.4
NPRL3-214ENST00000622194 SCAF1Q9H7N4 1312 aaKnown RBP23.75■■□□□ 1.39
NPRL3-214ENST00000622194 DNMBPQ6XZF7 1577 aa23.75■■□□□ 1.39
NPRL3-214ENST00000622194 CCNB3Q8WWL7 1395 aa23.74■■□□□ 1.39
NPRL3-214ENST00000622194 FAM50AQ14320 339 aaKnown RBP23.73■■□□□ 1.39
NPRL3-214ENST00000622194 FHOD3Q2V2M9 1422 aa23.71■■□□□ 1.39
NPRL3-214ENST00000622194 YTHDC1Q96MU7 727 aaKnown RBP23.7■■□□□ 1.38
NPRL3-214ENST00000622194 DHX57Q6P158 1386 aaKnown RBP23.68■■□□□ 1.38
NPRL3-214ENST00000622194 URB2Q14146 1524 aaKnown RBP23.68■■□□□ 1.38
NPRL3-214ENST00000622194 ABCA10Q8WWZ4 1543 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms