RNA–Protein interactions for RNA: ENST00000332220.10

YBX1-202, Transcript of Y-box binding protein 1, humanhuman

TSL 5

Gene YBX1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-202ENST00000332220 NISCHQ9Y2I1 1504 aa50.57■■■■■ 5.69
YBX1-202ENST00000332220 CCDC180Q9P1Z9 1646 aa44.93■■■■■ 4.78
YBX1-202ENST00000332220 ABCC9O60706 1549 aa43.59■■■■■ 4.57
YBX1-202ENST00000332220 ZCCHC6Q5VYS8 1495 aaKnown RBP42.2■■■■■ 4.35
YBX1-202ENST00000332220 NACADO15069 1562 aa42.07■■■■■ 4.33
YBX1-202ENST00000332220 RB1CC1Q8TDY2 1594 aa42.06■■■■■ 4.32
YBX1-202ENST00000332220 DCAF8L2P0C7V8 631 aa42.03■■■■■ 4.32
YBX1-202ENST00000332220 MYO15BQ96JP2 1530 aa41.88■■■■■ 4.29
YBX1-202ENST00000332220 DCAF1Q9Y4B6 1507 aa41.84■■■■■ 4.29
YBX1-202ENST00000332220 UNC13AQ9UPW8 1703 aa41.37■■■■■ 4.21
YBX1-202ENST00000332220 SCRIBQ14160 1630 aa41■■■■■ 4.15
YBX1-202ENST00000332220 BICRAQ9NZM4 1560 aa40.86■■■■■ 4.13
YBX1-202ENST00000332220 PABPN1Q86U42 306 aaKnown RBP eCLIP40.73■■■■■ 4.11
YBX1-202ENST00000332220 SHROOM4Q9ULL8 1493 aa40.31■■■■■ 4.04
YBX1-202ENST00000332220 DNAJC5BQ9UF47 199 aa39.72■■■■□ 3.95
YBX1-202ENST00000332220 EIF4G1Q04637 1599 aaKnown RBP39.71■■■■□ 3.95
YBX1-202ENST00000332220 CC2D2AQ9P2K1 1620 aa39.5■■■■□ 3.91
YBX1-202ENST00000332220 CECR2Q9BXF3 1484 aa39.39■■■■□ 3.9
YBX1-202ENST00000332220 SMARCA4P51532 1647 aa39.25■■■■□ 3.87
YBX1-202ENST00000332220 BAZ1AQ9NRL2 1556 aaPredicted RBP39.17■■■■□ 3.86
YBX1-202ENST00000332220 MROH2BQ7Z745 1585 aa39.01■■■■□ 3.84
YBX1-202ENST00000332220 ATAD2BQ9ULI0 1458 aa38.87■■■■□ 3.81
YBX1-202ENST00000332220 SMARCA2P51531 1590 aa38.84■■■■□ 3.81
YBX1-202ENST00000332220 PEG3Q9GZU2 1588 aa38.82■■■■□ 3.8
YBX1-202ENST00000332220 NCAPD3P42695 1498 aa38.77■■■■□ 3.8
YBX1-202ENST00000332220 WIZO95785 1651 aa38.68■■■■□ 3.78
YBX1-202ENST00000332220 HMGXB3Q12766 1538 aa38.67■■■■□ 3.78
YBX1-202ENST00000332220 RSF1Q96T23 1441 aaPredicted RBP38.62■■■■□ 3.77
YBX1-202ENST00000332220 BAZ1BQ9UIG0 1483 aaKnown RBP38.57■■■■□ 3.76
YBX1-202ENST00000332220 TOP2AP11388 1531 aaKnown RBP38.21■■■■□ 3.71
YBX1-202ENST00000332220 NESP48681 1621 aa37.85■■■■□ 3.65
YBX1-202ENST00000332220 SUPT5HO00267 1087 aaKnown RBP37.82■■■■□ 3.64
YBX1-202ENST00000332220 LAMC3Q9Y6N6 1575 aa37.77■■■■□ 3.64
YBX1-202ENST00000332220 CCDC88BA6NC98 1476 aa37.73■■■■□ 3.63
YBX1-202ENST00000332220 CADPSQ9ULU8 1353 aa37.64■■■■□ 3.62
YBX1-202ENST00000332220 KIF21AQ7Z4S6 1674 aa37.53■■■■□ 3.6
YBX1-202ENST00000332220 CFTRP13569 1480 aa37.52■■■■□ 3.6
YBX1-202ENST00000332220 PRDM2Q13029 1718 aa37.5■■■■□ 3.59
YBX1-202ENST00000332220 ERCC6Q03468 1493 aa37.5■■■■□ 3.59
YBX1-202ENST00000332220 PDS5BQ9NTI5 1447 aa37.41■■■■□ 3.58
YBX1-202ENST00000332220 FANCD2Q9BXW9 1451 aa37.26■■■■□ 3.55
YBX1-202ENST00000332220 THOC2Q8NI27 1593 aaKnown RBP37.25■■■■□ 3.55
YBX1-202ENST00000332220 CEP164Q9UPV0 1460 aa37.19■■■■□ 3.54
YBX1-202ENST00000332220 MRC2Q9UBG0 1479 aa37.07■■■■□ 3.53
YBX1-202ENST00000332220 CUX2O14529 1486 aa37■■■■□ 3.51
YBX1-202ENST00000332220 WDR62O43379 1518 aa36.97■■■■□ 3.51
YBX1-202ENST00000332220 URB2Q14146 1524 aaKnown RBP36.91■■■■□ 3.5
YBX1-202ENST00000332220 TOPBP1Q92547 1522 aa36.73■■■■□ 3.47
YBX1-202ENST00000332220 DNMBPQ6XZF7 1577 aa36.73■■■■□ 3.47
YBX1-202ENST00000332220 ABCC8Q09428 1581 aa36.66■■■■□ 3.46
YBX1-202ENST00000332220 CUX1P39880 1505 aa36.59■■■■□ 3.45
YBX1-202ENST00000332220 POLA1P09884 1462 aaPredicted RBP36.43■■■■□ 3.42
YBX1-202ENST00000332220 BIVM-ERCC5R4GMW8 1640 aa36.41■■■■□ 3.42
YBX1-202ENST00000332220 SYNJ1O43426 1573 aa36.4■■■■□ 3.42
YBX1-202ENST00000332220 FGD5Q6ZNL6 1462 aa36.39■■■■□ 3.42
YBX1-202ENST00000332220 WRNQ14191 1432 aaPredicted RBP eCLIP36.39■■■■□ 3.42
YBX1-202ENST00000332220 TARBP1Q13395 1621 aaKnown RBP36.37■■■■□ 3.41
YBX1-202ENST00000332220 IFT140Q96RY7 1462 aa36.37■■■■□ 3.41
YBX1-202ENST00000332220 TOP2BQ02880 1626 aa36.36■■■■□ 3.41
YBX1-202ENST00000332220 RAD54L2Q9Y4B4 1467 aa36.27■■■■□ 3.4
YBX1-202ENST00000332220 ZNF608Q9ULD9 1512 aaPredicted RBP36.24■■■■□ 3.39
YBX1-202ENST00000332220 SOGA1O94964 1423 aa36.23■■■■□ 3.39
YBX1-202ENST00000332220 WDR97A6NE52 1622 aa36.21■■■■□ 3.39
YBX1-202ENST00000332220 EIF4G3O43432 1585 aaKnown RBP36.17■■■■□ 3.38
YBX1-202ENST00000332220 AQRO60306 1485 aaKnown RBP eCLIP36.04■■■■□ 3.361e-8■■■■■ 28.6
YBX1-202ENST00000332220 ABCA10Q8WWZ4 1543 aa36.03■■■■□ 3.36
YBX1-202ENST00000332220 TDRD9Q8NDG6 1382 aaKnown RBP36■■■■□ 3.35
YBX1-202ENST00000332220 ABCA5Q8WWZ7 1642 aa35.94■■■■□ 3.34
YBX1-202ENST00000332220 PBRM1Q86U86 1689 aa35.92■■■■□ 3.34
YBX1-202ENST00000332220 GAPVD1Q14C86 1478 aa35.84■■■■□ 3.33
YBX1-202ENST00000332220 GRIN2BQ13224 1484 aa35.78■■■■□ 3.32
YBX1-202ENST00000332220 CHD1O14646 1710 aa35.74■■■■□ 3.31
YBX1-202ENST00000332220 SNAPC4Q5SXM2 1469 aa35.73■■■■□ 3.31
YBX1-202ENST00000332220 MAGI1Q96QZ7 1491 aaPredicted RBP35.67■■■■□ 3.3
YBX1-202ENST00000332220 TRIM41Q8WV44 630 aa35.66■■■■□ 3.3
YBX1-202ENST00000332220 ERICH3Q5RHP9 1530 aa35.61■■■■□ 3.29
YBX1-202ENST00000332220 KIF27Q86VH2 1401 aa35.57■■■■□ 3.29
YBX1-202ENST00000332220 ADAMTS12P58397 1594 aa35.56■■■■□ 3.28
YBX1-202ENST00000332220 SYNJ2O15056 1496 aa35.53■■■■□ 3.28
YBX1-202ENST00000332220 CHIC1Q5VXU3 224 aa35.48■■■■□ 3.27
YBX1-202ENST00000332220 FBLN2P98095 1184 aa35.47■■■■□ 3.27
YBX1-202ENST00000332220 DNAJC5Q9H3Z4 198 aa35.47■■■■□ 3.27
YBX1-202ENST00000332220 RUSC2Q8N2Y8 1516 aa35.46■■■■□ 3.27
YBX1-202ENST00000332220 OSCARQ8IYS5 282 aa35.45■■■■□ 3.27
YBX1-202ENST00000332220 FHAD1B1AJZ9 1412 aa35.41■■■■□ 3.26
YBX1-202ENST00000332220 CUL7Q14999 1698 aa35.41■■■■□ 3.26
YBX1-202ENST00000332220 CHMP7Q8WUX9 453 aaPredicted RBP35.41■■■■□ 3.26
YBX1-202ENST00000332220 IGF1RP08069 1367 aa35.39■■■■□ 3.26
YBX1-202ENST00000332220 GRIN2AQ12879 1464 aa35.35■■■■□ 3.25
YBX1-202ENST00000332220 CLASP1Q7Z460 1538 aa35.25■■■■□ 3.23
YBX1-202ENST00000332220 CEP170Q5SW79 1584 aa35.23■■■■□ 3.23
YBX1-202ENST00000332220 CARMIL1Q5VZK9 1371 aa35.19■■■■□ 3.22
YBX1-202ENST00000332220 NUP160Q12769 1436 aa35.17■■■■□ 3.22
YBX1-202ENST00000332220 EEA1Q15075 1411 aa35.07■■■■□ 3.21
YBX1-202ENST00000332220 RAPGEF2Q9Y4G8 1499 aa35.04■■■■□ 3.2
YBX1-202ENST00000332220 RIMBP3CA6NJZ7 1639 aa35.03■■■■□ 3.2
YBX1-202ENST00000332220 RIMBP3BA6NNM3 1639 aa35.03■■■■□ 3.2
YBX1-202ENST00000332220 RIMBP3Q9UFD9 1639 aa35.03■■■■□ 3.2
YBX1-202ENST00000332220 PRXQ9BXM0 1461 aa35■■■■□ 3.19
YBX1-202ENST00000332220 ARHGEF11O15085 1522 aa34.99■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms