RNA–Protein interactions for RNA: ENST00000464069.1

NPRL3-206, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 2

Gene NPRL3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-206ENST00000464069 NISCHQ9Y2I1 1504 aa34.36■■■■□ 3.09
NPRL3-206ENST00000464069 ABCC9O60706 1549 aa31.71■■■□□ 2.67
NPRL3-206ENST00000464069 CCDC180Q9P1Z9 1646 aa31.13■■■□□ 2.57
NPRL3-206ENST00000464069 DNAJC5BQ9UF47 199 aa30.39■■■□□ 2.46
NPRL3-206ENST00000464069 RB1CC1Q8TDY2 1594 aa29.95■■■□□ 2.39
NPRL3-206ENST00000464069 NACADO15069 1562 aa29.62■■■□□ 2.33
NPRL3-206ENST00000464069 PABPN1Q86U42 306 aaKnown RBP eCLIP29.42■■■□□ 2.3
NPRL3-206ENST00000464069 DCAF8L2P0C7V8 631 aa29.2■■■□□ 2.26
NPRL3-206ENST00000464069 UNC13AQ9UPW8 1703 aa29.2■■■□□ 2.26
NPRL3-206ENST00000464069 BICRAQ9NZM4 1560 aa29.09■■■□□ 2.25
NPRL3-206ENST00000464069 MYO15BQ96JP2 1530 aa29.06■■■□□ 2.24
NPRL3-206ENST00000464069 SHROOM4Q9ULL8 1493 aa28.75■■■□□ 2.19
NPRL3-206ENST00000464069 CECR2Q9BXF3 1484 aa28.69■■■□□ 2.18
NPRL3-206ENST00000464069 CC2D2AQ9P2K1 1620 aa28.63■■■□□ 2.17
NPRL3-206ENST00000464069 DNAJC5Q9H3Z4 198 aa28.47■■■□□ 2.15
NPRL3-206ENST00000464069 EIF4G1Q04637 1599 aaKnown RBP28.43■■■□□ 2.14
NPRL3-206ENST00000464069 DCAF1Q9Y4B6 1507 aa28.42■■■□□ 2.14
NPRL3-206ENST00000464069 ZCCHC6Q5VYS8 1495 aaKnown RBP28.34■■■□□ 2.13
NPRL3-206ENST00000464069 SCRIBQ14160 1630 aa28.22■■■□□ 2.11
NPRL3-206ENST00000464069 CUX2O14529 1486 aa27.71■■■□□ 2.03
NPRL3-206ENST00000464069 ERCC6Q03468 1493 aa27.45■■□□□ 1.99
NPRL3-206ENST00000464069 NCAPD3P42695 1498 aa27.38■■□□□ 1.97
NPRL3-206ENST00000464069 ATAD2BQ9ULI0 1458 aa27.15■■□□□ 1.94
NPRL3-206ENST00000464069 HMGXB3Q12766 1538 aa27.08■■□□□ 1.93
NPRL3-206ENST00000464069 SMARCA2P51531 1590 aa27.05■■□□□ 1.92
NPRL3-206ENST00000464069 NESP48681 1621 aa27.05■■□□□ 1.92
NPRL3-206ENST00000464069 THOC2Q8NI27 1593 aaKnown RBP26.93■■□□□ 1.9
NPRL3-206ENST00000464069 SMARCA4P51532 1647 aa26.92■■□□□ 1.9
NPRL3-206ENST00000464069 BAZ1BQ9UIG0 1483 aaKnown RBP26.83■■□□□ 1.89
NPRL3-206ENST00000464069 LAMC3Q9Y6N6 1575 aa26.83■■□□□ 1.89
NPRL3-206ENST00000464069 TRIM41Q8WV44 630 aa26.82■■□□□ 1.88
NPRL3-206ENST00000464069 PEG3Q9GZU2 1588 aa26.73■■□□□ 1.87
NPRL3-206ENST00000464069 BAZ1AQ9NRL2 1556 aaPredicted RBP26.72■■□□□ 1.87
NPRL3-206ENST00000464069 PDS5BQ9NTI5 1447 aa26.72■■□□□ 1.87
NPRL3-206ENST00000464069 KIF21AQ7Z4S6 1674 aa26.66■■□□□ 1.86
NPRL3-206ENST00000464069 MRC2Q9UBG0 1479 aa26.49■■□□□ 1.83
NPRL3-206ENST00000464069 CADPSQ9ULU8 1353 aa26.49■■□□□ 1.83
NPRL3-206ENST00000464069 WDR62O43379 1518 aa26.45■■□□□ 1.83
NPRL3-206ENST00000464069 MROH2BQ7Z745 1585 aa26.43■■□□□ 1.82
NPRL3-206ENST00000464069 OSCARQ8IYS5 282 aa26.33■■□□□ 1.81
NPRL3-206ENST00000464069 CEP164Q9UPV0 1460 aa26.24■■□□□ 1.79
NPRL3-206ENST00000464069 FANCD2Q9BXW9 1451 aa26.15■■□□□ 1.78
NPRL3-206ENST00000464069 CFTRP13569 1480 aa26.05■■□□□ 1.76
NPRL3-206ENST00000464069 WIZO95785 1651 aa26.04■■□□□ 1.76
NPRL3-206ENST00000464069 RIMBP3CA6NJZ7 1639 aa25.98■■□□□ 1.75
NPRL3-206ENST00000464069 RIMBP3BA6NNM3 1639 aa25.98■■□□□ 1.75
NPRL3-206ENST00000464069 RIMBP3Q9UFD9 1639 aa25.98■■□□□ 1.75
NPRL3-206ENST00000464069 URB2Q14146 1524 aaKnown RBP25.97■■□□□ 1.75
NPRL3-206ENST00000464069 ARHGEF11O15085 1522 aa25.86■■□□□ 1.73
NPRL3-206ENST00000464069 IFT140Q96RY7 1462 aa25.78■■□□□ 1.72
NPRL3-206ENST00000464069 ZNF608Q9ULD9 1512 aaPredicted RBP25.74■■□□□ 1.71
NPRL3-206ENST00000464069 TOP2AP11388 1531 aaKnown RBP25.73■■□□□ 1.71
NPRL3-206ENST00000464069 CYB5RLQ6IPT4 315 aa25.7■■□□□ 1.7
NPRL3-206ENST00000464069 RSF1Q96T23 1441 aaPredicted RBP25.68■■□□□ 1.7
NPRL3-206ENST00000464069 PRDM2Q13029 1718 aa25.66■■□□□ 1.7
NPRL3-206ENST00000464069 TRHP20396 242 aaPredicted RBP25.61■■□□□ 1.69
NPRL3-206ENST00000464069 TOPBP1Q92547 1522 aa25.58■■□□□ 1.69
NPRL3-206ENST00000464069 ARAP1Q96P48 1450 aa25.55■■□□□ 1.68
NPRL3-206ENST00000464069 EIF4G3O43432 1585 aaKnown RBP25.55■■□□□ 1.68
NPRL3-206ENST00000464069 ABCC8Q09428 1581 aa25.55■■□□□ 1.68
NPRL3-206ENST00000464069 CHD1O14646 1710 aa25.46■■□□□ 1.67
NPRL3-206ENST00000464069 CCDC88BA6NC98 1476 aa25.44■■□□□ 1.66
NPRL3-206ENST00000464069 AQRO60306 1485 aaKnown RBP eCLIP25.43■■□□□ 1.668e-7■■■□□ 16
NPRL3-206ENST00000464069 DNMBPQ6XZF7 1577 aa25.43■■□□□ 1.66
NPRL3-206ENST00000464069 TARBP1Q13395 1621 aaKnown RBP25.4■■□□□ 1.66
NPRL3-206ENST00000464069 AEBP2Q6ZN18 517 aaPredicted RBP25.38■■□□□ 1.65
NPRL3-206ENST00000464069 FBLN2P98095 1184 aa25.37■■□□□ 1.65
NPRL3-206ENST00000464069 POLA1P09884 1462 aaPredicted RBP25.28■■□□□ 1.64
NPRL3-206ENST00000464069 CLASP1Q7Z460 1538 aa25.22■■□□□ 1.63
NPRL3-206ENST00000464069 TDRD9Q8NDG6 1382 aaKnown RBP25.18■■□□□ 1.62
NPRL3-206ENST00000464069 RAD54L2Q9Y4B4 1467 aa25.16■■□□□ 1.62
NPRL3-206ENST00000464069 WDR97A6NE52 1622 aa25.16■■□□□ 1.62
NPRL3-206ENST00000464069 SOGA1O94964 1423 aa25.16■■□□□ 1.62
NPRL3-206ENST00000464069 SNAPC4Q5SXM2 1469 aa25.15■■□□□ 1.62
NPRL3-206ENST00000464069 SYNJ1O43426 1573 aa25.14■■□□□ 1.62
NPRL3-206ENST00000464069 CHMP7Q8WUX9 453 aaPredicted RBP25.13■■□□□ 1.61
NPRL3-206ENST00000464069 MAGI1Q96QZ7 1491 aaPredicted RBP25.11■■□□□ 1.61
NPRL3-206ENST00000464069 SYNJ2O15056 1496 aa25.03■■□□□ 1.6
NPRL3-206ENST00000464069 GRIN2BQ13224 1484 aa25.03■■□□□ 1.6
NPRL3-206ENST00000464069 GAPVD1Q14C86 1478 aa25.01■■□□□ 1.59
NPRL3-206ENST00000464069 FGD5Q6ZNL6 1462 aa25.01■■□□□ 1.59
NPRL3-206ENST00000464069 CUX1P39880 1505 aa24.87■■□□□ 1.57
NPRL3-206ENST00000464069 PBRM1Q86U86 1689 aa24.8■■□□□ 1.56
NPRL3-206ENST00000464069 ABCA10Q8WWZ4 1543 aa24.73■■□□□ 1.55
NPRL3-206ENST00000464069 ERCC6L2Q5T890 1561 aa24.72■■□□□ 1.55
NPRL3-206ENST00000464069 ABCA5Q8WWZ7 1642 aa24.72■■□□□ 1.55
NPRL3-206ENST00000464069 GRIN2AQ12879 1464 aa24.7■■□□□ 1.54
NPRL3-206ENST00000464069 NUP160Q12769 1436 aa24.67■■□□□ 1.54
NPRL3-206ENST00000464069 CEP170Q5SW79 1584 aa24.67■■□□□ 1.54
NPRL3-206ENST00000464069 KIF13AQ9H1H9 1805 aa24.61■■□□□ 1.53
NPRL3-206ENST00000464069 SHROOM2Q13796 1616 aa24.61■■□□□ 1.53
NPRL3-206ENST00000464069 ADAMTS12P58397 1594 aa24.57■■□□□ 1.52
NPRL3-206ENST00000464069 FHAD1B1AJZ9 1412 aa24.52■■□□□ 1.52
NPRL3-206ENST00000464069 WRNQ14191 1432 aaPredicted RBP eCLIP24.51■■□□□ 1.51
NPRL3-206ENST00000464069 ABCC10Q5T3U5 1492 aa24.46■■□□□ 1.51
NPRL3-206ENST00000464069 FAM69CQ0P6D2 419 aa24.45■■□□□ 1.5
NPRL3-206ENST00000464069 PRG4Q92954 1404 aaPredicted RBP24.44■■□□□ 1.5
NPRL3-206ENST00000464069 JPH4Q96JJ6 628 aa24.41■■□□□ 1.5
NPRL3-206ENST00000464069 ERICH3Q5RHP9 1530 aa24.4■■□□□ 1.5
NPRL3-206ENST00000464069 MAPKBP1O60336 1514 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms