Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.89■■□□□ 1.1
PDGFAP04085 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
PDGFAP04085 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
PDGFAP04085 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDGFAP04085 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.89■■□□□ 1.09
PDGFAP04085 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.89■■□□□ 1.09
PDGFAP04085 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
PDGFAP04085 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDGFAP04085 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
PDGFAP04085 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDGFAP04085 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
PDGFAP04085 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.88■■□□□ 1.09
PDGFAP04085 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
PDGFAP04085 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.88■■□□□ 1.09
PDGFAP04085 MIR3621-201ENST00000580529 85 ntBASIC21.88■■□□□ 1.09
PDGFAP04085 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDGFAP04085 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PDGFAP04085 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDGFAP04085 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.87■■□□□ 1.09
PDGFAP04085 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDGFAP04085 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDGFAP04085 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDGFAP04085 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.87■■□□□ 1.09
PDGFAP04085 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDGFAP04085 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
PDGFAP04085 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.86■■□□□ 1.09
PDGFAP04085 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
PDGFAP04085 MIR4466-201ENST00000606121 54 ntBASIC21.86■■□□□ 1.09
PDGFAP04085 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
PDGFAP04085 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.85■■□□□ 1.09
PDGFAP04085 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDGFAP04085 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.85■■□□□ 1.09
PDGFAP04085 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.85■■□□□ 1.09
PDGFAP04085 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PDGFAP04085 MTDHP2-201ENST00000601468 714 ntBASIC21.85■■□□□ 1.09
PDGFAP04085 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDGFAP04085 MIR6724-1-201ENST00000616420 92 ntBASIC21.85■■□□□ 1.09
PDGFAP04085 MIR6724-2-201ENST00000616483 92 ntBASIC21.85■■□□□ 1.09
PDGFAP04085 MIR6724-4-201ENST00000617390 92 ntBASIC21.85■■□□□ 1.09
PDGFAP04085 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.85■■□□□ 1.09
PDGFAP04085 MIR6724-3-201ENST00000622482 92 ntBASIC21.85■■□□□ 1.09
PDGFAP04085 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.85■■□□□ 1.09
PDGFAP04085 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
PDGFAP04085 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PDGFAP04085 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDGFAP04085 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.84■■□□□ 1.09
PDGFAP04085 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.84■■□□□ 1.09
PDGFAP04085 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDGFAP04085 AC096631.2-201ENST00000436136 790 ntBASIC21.84■■□□□ 1.09
PDGFAP04085 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.84■■□□□ 1.09
PDGFAP04085 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PDGFAP04085 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDGFAP04085 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDGFAP04085 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.84■■□□□ 1.09
PDGFAP04085 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.84■■□□□ 1.09
PDGFAP04085 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PDGFAP04085 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
PDGFAP04085 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
PDGFAP04085 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.83■■□□□ 1.09
PDGFAP04085 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.83■■□□□ 1.09
PDGFAP04085 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
PDGFAP04085 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDGFAP04085 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.83■■□□□ 1.09
PDGFAP04085 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.83■■□□□ 1.08
PDGFAP04085 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PDGFAP04085 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDGFAP04085 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.82■■□□□ 1.08
PDGFAP04085 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.82■■□□□ 1.08
PDGFAP04085 AC005837.3-201ENST00000612163 286 ntBASIC21.82■■□□□ 1.08
PDGFAP04085 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.82■■□□□ 1.08
PDGFAP04085 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDGFAP04085 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDGFAP04085 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDGFAP04085 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.81■■□□□ 1.08
PDGFAP04085 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDGFAP04085 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.81■■□□□ 1.08
PDGFAP04085 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.81■■□□□ 1.08
PDGFAP04085 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDGFAP04085 AP004609.3-201ENST00000610705 1884 ntBASIC21.81■■□□□ 1.08
PDGFAP04085 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.8■■□□□ 1.08
PDGFAP04085 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDGFAP04085 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.8■■□□□ 1.08
PDGFAP04085 AL356740.2-201ENST00000601559 647 ntBASIC21.8■■□□□ 1.08
PDGFAP04085 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PDGFAP04085 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDGFAP04085 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
PDGFAP04085 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.79■■□□□ 1.08
PDGFAP04085 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PDGFAP04085 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDGFAP04085 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDGFAP04085 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.79■■□□□ 1.08
PDGFAP04085 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PDGFAP04085 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PDGFAP04085 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.78■■□□□ 1.08
PDGFAP04085 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.78■■□□□ 1.08
PDGFAP04085 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDGFAP04085 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDGFAP04085 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDGFAP04085 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.78■■□□□ 1.08
PDGFAP04085 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms