Protein–RNA interactions for Protein: O75556

SCGB2A1, Mammaglobin-B, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB2A1O75556 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCGB2A1O75556 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCGB2A1O75556 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.43■□□□□ 0.54
SCGB2A1O75556 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCGB2A1O75556 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCGB2A1O75556 AC135731.1-201ENST00000569415 2548 ntBASIC18.43■□□□□ 0.54
SCGB2A1O75556 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SCGB2A1O75556 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.43■□□□□ 0.54
SCGB2A1O75556 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.43■□□□□ 0.54
SCGB2A1O75556 MIR4449-201ENST00000578365 66 ntBASIC18.43■□□□□ 0.54
SCGB2A1O75556 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.43■□□□□ 0.54
SCGB2A1O75556 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCGB2A1O75556 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCGB2A1O75556 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCGB2A1O75556 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
SCGB2A1O75556 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCGB2A1O75556 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCGB2A1O75556 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.42■□□□□ 0.54
SCGB2A1O75556 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCGB2A1O75556 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCGB2A1O75556 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.42■□□□□ 0.54
SCGB2A1O75556 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCGB2A1O75556 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCGB2A1O75556 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.42■□□□□ 0.54
SCGB2A1O75556 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SCGB2A1O75556 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCGB2A1O75556 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCGB2A1O75556 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SCGB2A1O75556 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCGB2A1O75556 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCGB2A1O75556 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
SCGB2A1O75556 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SCGB2A1O75556 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCGB2A1O75556 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.41■□□□□ 0.54
SCGB2A1O75556 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.41■□□□□ 0.54
SCGB2A1O75556 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SCGB2A1O75556 AC138932.3-201ENST00000567634 1902 ntBASIC18.41■□□□□ 0.54
SCGB2A1O75556 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCGB2A1O75556 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCGB2A1O75556 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCGB2A1O75556 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCGB2A1O75556 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCGB2A1O75556 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCGB2A1O75556 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCGB2A1O75556 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCGB2A1O75556 GPX1-201ENST00000419349 1106 ntBASIC18.4■□□□□ 0.54
SCGB2A1O75556 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SCGB2A1O75556 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.4■□□□□ 0.54
SCGB2A1O75556 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCGB2A1O75556 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.4■□□□□ 0.54
SCGB2A1O75556 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SCGB2A1O75556 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SCGB2A1O75556 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
SCGB2A1O75556 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SCGB2A1O75556 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.39■□□□□ 0.54
SCGB2A1O75556 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SCGB2A1O75556 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCGB2A1O75556 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SCGB2A1O75556 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SCGB2A1O75556 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.39■□□□□ 0.53
SCGB2A1O75556 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCGB2A1O75556 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.39■□□□□ 0.53
SCGB2A1O75556 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SCGB2A1O75556 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SCGB2A1O75556 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCGB2A1O75556 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCGB2A1O75556 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCGB2A1O75556 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCGB2A1O75556 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCGB2A1O75556 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SCGB2A1O75556 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SCGB2A1O75556 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.37■□□□□ 0.53
SCGB2A1O75556 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCGB2A1O75556 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCGB2A1O75556 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCGB2A1O75556 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.37■□□□□ 0.53
SCGB2A1O75556 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCGB2A1O75556 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCGB2A1O75556 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
SCGB2A1O75556 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCGB2A1O75556 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SCGB2A1O75556 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCGB2A1O75556 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCGB2A1O75556 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SCGB2A1O75556 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCGB2A1O75556 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SCGB2A1O75556 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCGB2A1O75556 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.36■□□□□ 0.53
SCGB2A1O75556 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.36■□□□□ 0.53
SCGB2A1O75556 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.36■□□□□ 0.53
SCGB2A1O75556 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCGB2A1O75556 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SCGB2A1O75556 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.36■□□□□ 0.53
SCGB2A1O75556 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCGB2A1O75556 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCGB2A1O75556 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCGB2A1O75556 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCGB2A1O75556 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
SCGB2A1O75556 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCGB2A1O75556 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms