Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 PVT1_1.1-201ENST00000615125 194 ntBASIC21.8■■□□□ 1.08
HCN1O60741 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.8■■□□□ 1.08
HCN1O60741 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.8■■□□□ 1.08
HCN1O60741 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HCN1O60741 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HCN1O60741 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HCN1O60741 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.79■■□□□ 1.08
HCN1O60741 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HCN1O60741 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HCN1O60741 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.79■■□□□ 1.08
HCN1O60741 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HCN1O60741 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
HCN1O60741 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.79■■□□□ 1.08
HCN1O60741 KRT8P33-201ENST00000508125 1423 ntBASIC21.79■■□□□ 1.08
HCN1O60741 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HCN1O60741 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HCN1O60741 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HCN1O60741 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HCN1O60741 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HCN1O60741 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.78■■□□□ 1.08
HCN1O60741 AC103834.1-201ENST00000520383 144 ntBASIC21.78■■□□□ 1.08
HCN1O60741 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.78■■□□□ 1.08
HCN1O60741 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HCN1O60741 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.78■■□□□ 1.08
HCN1O60741 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HCN1O60741 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
HCN1O60741 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.77■■□□□ 1.08
HCN1O60741 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HCN1O60741 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.77■■□□□ 1.08
HCN1O60741 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
HCN1O60741 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HCN1O60741 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HCN1O60741 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HCN1O60741 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HCN1O60741 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HCN1O60741 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HCN1O60741 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HCN1O60741 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HCN1O60741 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
HCN1O60741 AC022211.4-201ENST00000625094 2161 ntBASIC21.75■■□□□ 1.07
HCN1O60741 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HCN1O60741 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HCN1O60741 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.75■■□□□ 1.07
HCN1O60741 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.75■■□□□ 1.07
HCN1O60741 AL451085.2-201ENST00000605085 799 ntBASIC21.75■■□□□ 1.07
HCN1O60741 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.75■■□□□ 1.07
HCN1O60741 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HCN1O60741 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HCN1O60741 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HCN1O60741 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HCN1O60741 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.74■■□□□ 1.07
HCN1O60741 LONRF2P2-201ENST00000439212 571 ntBASIC21.74■■□□□ 1.07
HCN1O60741 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
HCN1O60741 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
HCN1O60741 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.74■■□□□ 1.07
HCN1O60741 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HCN1O60741 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
HCN1O60741 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
HCN1O60741 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.73■■□□□ 1.07
HCN1O60741 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HCN1O60741 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HCN1O60741 AL035685.1-201ENST00000636663 812 ntBASIC21.73■■□□□ 1.07
HCN1O60741 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HCN1O60741 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HCN1O60741 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.72■■□□□ 1.07
HCN1O60741 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HCN1O60741 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HCN1O60741 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
HCN1O60741 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
HCN1O60741 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.72■■□□□ 1.07
HCN1O60741 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.72■■□□□ 1.07
HCN1O60741 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HCN1O60741 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
HCN1O60741 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HCN1O60741 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HCN1O60741 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.7■■□□□ 1.07
HCN1O60741 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HCN1O60741 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HCN1O60741 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
HCN1O60741 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
HCN1O60741 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
HCN1O60741 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
HCN1O60741 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.7■■□□□ 1.06
HCN1O60741 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
HCN1O60741 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HCN1O60741 AC138932.3-201ENST00000567634 1902 ntBASIC21.69■■□□□ 1.06
HCN1O60741 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HCN1O60741 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.69■■□□□ 1.06
HCN1O60741 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HCN1O60741 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
HCN1O60741 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HCN1O60741 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
HCN1O60741 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.68■■□□□ 1.06
HCN1O60741 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.68■■□□□ 1.06
HCN1O60741 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HCN1O60741 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HCN1O60741 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HCN1O60741 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HCN1O60741 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HCN1O60741 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms