Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
TBC1D4O60343 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TBC1D4O60343 TSPY9P-201ENST00000440215 945 ntBASIC25.01■■□□□ 1.59
TBC1D4O60343 TSPY11P-201ENST00000442607 1045 ntBASIC25.01■■□□□ 1.59
TBC1D4O60343 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TBC1D4O60343 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TBC1D4O60343 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25■■□□□ 1.59
TBC1D4O60343 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
TBC1D4O60343 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TBC1D4O60343 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25■■□□□ 1.59
TBC1D4O60343 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25■■□□□ 1.59
TBC1D4O60343 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25■■□□□ 1.59
TBC1D4O60343 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TBC1D4O60343 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TBC1D4O60343 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
TBC1D4O60343 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
TBC1D4O60343 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.99■■□□□ 1.59
TBC1D4O60343 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
TBC1D4O60343 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
TBC1D4O60343 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
TBC1D4O60343 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.98■■□□□ 1.59
TBC1D4O60343 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC24.98■■□□□ 1.59
TBC1D4O60343 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
TBC1D4O60343 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TBC1D4O60343 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.98■■□□□ 1.59
TBC1D4O60343 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.98■■□□□ 1.59
TBC1D4O60343 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TBC1D4O60343 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
TBC1D4O60343 AC092803.2-201ENST00000564287 1899 ntBASIC24.98■■□□□ 1.59
TBC1D4O60343 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.97■■□□□ 1.59
TBC1D4O60343 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.97■■□□□ 1.59
TBC1D4O60343 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TBC1D4O60343 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
TBC1D4O60343 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
TBC1D4O60343 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TBC1D4O60343 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TBC1D4O60343 AC090877.2-201ENST00000558441 1738 ntBASIC24.96■■□□□ 1.59
TBC1D4O60343 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
TBC1D4O60343 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.96■■□□□ 1.59
TBC1D4O60343 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.96■■□□□ 1.59
TBC1D4O60343 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TBC1D4O60343 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TBC1D4O60343 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TBC1D4O60343 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
TBC1D4O60343 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.95■■□□□ 1.58
TBC1D4O60343 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.95■■□□□ 1.58
TBC1D4O60343 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
TBC1D4O60343 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
TBC1D4O60343 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.95■■□□□ 1.58
TBC1D4O60343 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.94■■□□□ 1.58
TBC1D4O60343 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TBC1D4O60343 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
TBC1D4O60343 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TBC1D4O60343 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
TBC1D4O60343 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.93■■□□□ 1.58
TBC1D4O60343 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TBC1D4O60343 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.93■■□□□ 1.58
TBC1D4O60343 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TBC1D4O60343 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
TBC1D4O60343 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
TBC1D4O60343 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
TBC1D4O60343 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TBC1D4O60343 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.92■■□□□ 1.58
TBC1D4O60343 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.92■■□□□ 1.58
TBC1D4O60343 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.92■■□□□ 1.58
TBC1D4O60343 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.92■■□□□ 1.58
TBC1D4O60343 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.92■■□□□ 1.58
TBC1D4O60343 AC010997.5-201ENST00000609182 354 ntBASIC24.92■■□□□ 1.58
TBC1D4O60343 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TBC1D4O60343 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.91■■□□□ 1.58
TBC1D4O60343 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.91■■□□□ 1.58
TBC1D4O60343 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.91■■□□□ 1.58
TBC1D4O60343 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.91■■□□□ 1.58
TBC1D4O60343 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.91■■□□□ 1.58
TBC1D4O60343 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.91■■□□□ 1.58
TBC1D4O60343 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.9■■□□□ 1.58
TBC1D4O60343 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
TBC1D4O60343 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
TBC1D4O60343 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.9■■□□□ 1.58
TBC1D4O60343 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
TBC1D4O60343 AC008406.3-201ENST00000620001 1374 ntBASIC24.9■■□□□ 1.58
TBC1D4O60343 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
TBC1D4O60343 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.89■■□□□ 1.58
TBC1D4O60343 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
TBC1D4O60343 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.58
TBC1D4O60343 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.89■■□□□ 1.58
TBC1D4O60343 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
TBC1D4O60343 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.88■■□□□ 1.57
TBC1D4O60343 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
TBC1D4O60343 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
TBC1D4O60343 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
TBC1D4O60343 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
TBC1D4O60343 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
TBC1D4O60343 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.87■■□□□ 1.57
TBC1D4O60343 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.87■■□□□ 1.57
TBC1D4O60343 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.87■■□□□ 1.57
TBC1D4O60343 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.87■■□□□ 1.57
TBC1D4O60343 MIR6724-1-201ENST00000616420 92 ntBASIC24.87■■□□□ 1.57
TBC1D4O60343 MIR6724-2-201ENST00000616483 92 ntBASIC24.87■■□□□ 1.57
TBC1D4O60343 MIR6724-4-201ENST00000617390 92 ntBASIC24.87■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms