Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.81■□□□□ 0.6
UPK2O00526 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPK2O00526 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPK2O00526 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPK2O00526 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPK2O00526 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPK2O00526 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPK2O00526 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPK2O00526 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPK2O00526 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UPK2O00526 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPK2O00526 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPK2O00526 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.8■□□□□ 0.6
UPK2O00526 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UPK2O00526 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
UPK2O00526 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPK2O00526 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPK2O00526 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPK2O00526 FOXO3B-201ENST00000395675 1928 ntBASIC18.8■□□□□ 0.6
UPK2O00526 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.8■□□□□ 0.6
UPK2O00526 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.79■□□□□ 0.6
UPK2O00526 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPK2O00526 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.79■□□□□ 0.6
UPK2O00526 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.79■□□□□ 0.6
UPK2O00526 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
UPK2O00526 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPK2O00526 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPK2O00526 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.79■□□□□ 0.6
UPK2O00526 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
UPK2O00526 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
UPK2O00526 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UPK2O00526 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UPK2O00526 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.78■□□□□ 0.6
UPK2O00526 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
UPK2O00526 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.78■□□□□ 0.6
UPK2O00526 AC009831.1-201ENST00000580420 1582 ntBASIC18.78■□□□□ 0.6
UPK2O00526 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UPK2O00526 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UPK2O00526 AC133552.2-201ENST00000619106 1032 ntBASIC18.78■□□□□ 0.6
UPK2O00526 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.78■□□□□ 0.6
UPK2O00526 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
UPK2O00526 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
UPK2O00526 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UPK2O00526 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.77■□□□□ 0.6
UPK2O00526 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UPK2O00526 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.77■□□□□ 0.6
UPK2O00526 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
UPK2O00526 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
UPK2O00526 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.77■□□□□ 0.59
UPK2O00526 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPK2O00526 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPK2O00526 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPK2O00526 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.76■□□□□ 0.59
UPK2O00526 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPK2O00526 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.76■□□□□ 0.59
UPK2O00526 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPK2O00526 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UPK2O00526 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UPK2O00526 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UPK2O00526 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UPK2O00526 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UPK2O00526 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UPK2O00526 RNF126P1-201ENST00000567452 1320 ntBASIC18.74■□□□□ 0.59
UPK2O00526 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.74■□□□□ 0.59
UPK2O00526 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
UPK2O00526 HLA-L-211ENST00000482052 1765 ntBASIC18.74■□□□□ 0.59
UPK2O00526 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
UPK2O00526 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPK2O00526 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPK2O00526 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
UPK2O00526 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
UPK2O00526 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UPK2O00526 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UPK2O00526 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
UPK2O00526 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
UPK2O00526 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
UPK2O00526 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.73■□□□□ 0.59
UPK2O00526 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.73■□□□□ 0.59
UPK2O00526 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.73■□□□□ 0.59
UPK2O00526 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.73■□□□□ 0.59
UPK2O00526 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UPK2O00526 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UPK2O00526 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPK2O00526 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UPK2O00526 AC004812.2-201ENST00000611079 2094 ntBASIC18.72■□□□□ 0.59
UPK2O00526 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
UPK2O00526 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.71■□□□□ 0.59
UPK2O00526 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UPK2O00526 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
UPK2O00526 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
UPK2O00526 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPK2O00526 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
UPK2O00526 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPK2O00526 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPK2O00526 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
UPK2O00526 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UPK2O00526 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UPK2O00526 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPK2O00526 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UPK2O00526 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms