Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDHR4A6H8M9 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.57■■□□□ 1.04
CDHR4A6H8M9 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.57■■□□□ 1.04
CDHR4A6H8M9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.57■■□□□ 1.04
CDHR4A6H8M9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.57■■□□□ 1.04
CDHR4A6H8M9 DUX4L9-201ENST00000449051 1259 ntBASIC21.57■■□□□ 1.04
CDHR4A6H8M9 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDHR4A6H8M9 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDHR4A6H8M9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDHR4A6H8M9 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
CDHR4A6H8M9 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
CDHR4A6H8M9 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDHR4A6H8M9 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.56■■□□□ 1.04
CDHR4A6H8M9 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.56■■□□□ 1.04
CDHR4A6H8M9 MIR6765-201ENST00000614092 87 ntBASIC21.56■■□□□ 1.04
CDHR4A6H8M9 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDHR4A6H8M9 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDHR4A6H8M9 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
CDHR4A6H8M9 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDHR4A6H8M9 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CDHR4A6H8M9 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CDHR4A6H8M9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.55■■□□□ 1.04
CDHR4A6H8M9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDHR4A6H8M9 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDHR4A6H8M9 LINC00543-201ENST00000567234 1845 ntBASIC21.55■■□□□ 1.04
CDHR4A6H8M9 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
CDHR4A6H8M9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDHR4A6H8M9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDHR4A6H8M9 AC087393.1-201ENST00000582896 145 ntBASIC21.54■■□□□ 1.04
CDHR4A6H8M9 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDHR4A6H8M9 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDHR4A6H8M9 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDHR4A6H8M9 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDHR4A6H8M9 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDHR4A6H8M9 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDHR4A6H8M9 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDHR4A6H8M9 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CDHR4A6H8M9 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDHR4A6H8M9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.53■■□□□ 1.04
CDHR4A6H8M9 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.53■■□□□ 1.04
CDHR4A6H8M9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDHR4A6H8M9 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDHR4A6H8M9 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDHR4A6H8M9 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDHR4A6H8M9 KRT18P60-201ENST00000312876 1297 ntBASIC21.52■■□□□ 1.04
CDHR4A6H8M9 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.04
CDHR4A6H8M9 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.52■■□□□ 1.04
CDHR4A6H8M9 AC129492.7-201ENST00000622992 756 ntBASIC21.52■■□□□ 1.04
CDHR4A6H8M9 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDHR4A6H8M9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDHR4A6H8M9 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDHR4A6H8M9 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDHR4A6H8M9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDHR4A6H8M9 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDHR4A6H8M9 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDHR4A6H8M9 AC141586.4-201ENST00000624558 1573 ntBASIC21.51■■□□□ 1.03
CDHR4A6H8M9 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDHR4A6H8M9 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.51■■□□□ 1.03
CDHR4A6H8M9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.51■■□□□ 1.03
CDHR4A6H8M9 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDHR4A6H8M9 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CDHR4A6H8M9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDHR4A6H8M9 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDHR4A6H8M9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDHR4A6H8M9 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDHR4A6H8M9 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDHR4A6H8M9 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.5■■□□□ 1.03
CDHR4A6H8M9 ABHD17AP5-201ENST00000580133 923 ntBASIC21.5■■□□□ 1.03
CDHR4A6H8M9 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDHR4A6H8M9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CDHR4A6H8M9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CDHR4A6H8M9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDHR4A6H8M9 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CDHR4A6H8M9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDHR4A6H8M9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDHR4A6H8M9 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDHR4A6H8M9 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.49■■□□□ 1.03
CDHR4A6H8M9 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDHR4A6H8M9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.49■■□□□ 1.03
CDHR4A6H8M9 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDHR4A6H8M9 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CDHR4A6H8M9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.48■■□□□ 1.03
CDHR4A6H8M9 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.48■■□□□ 1.03
CDHR4A6H8M9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDHR4A6H8M9 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDHR4A6H8M9 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDHR4A6H8M9 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDHR4A6H8M9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDHR4A6H8M9 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.48■■□□□ 1.03
CDHR4A6H8M9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CDHR4A6H8M9 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDHR4A6H8M9 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDHR4A6H8M9 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDHR4A6H8M9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.47■■□□□ 1.03
CDHR4A6H8M9 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CDHR4A6H8M9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDHR4A6H8M9 HLA-L-211ENST00000482052 1765 ntBASIC21.47■■□□□ 1.03
CDHR4A6H8M9 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDHR4A6H8M9 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.47■■□□□ 1.03
CDHR4A6H8M9 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms