Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM238LA0A1B0GVL6 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM238LA0A1B0GVL6 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM238LA0A1B0GVL6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM238LA0A1B0GVL6 AL356309.3-201ENST00000624132 1934 ntBASIC16.4■□□□□ 0.22
TMEM238LA0A1B0GVL6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.4■□□□□ 0.22
TMEM238LA0A1B0GVL6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TMEM238LA0A1B0GVL6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TMEM238LA0A1B0GVL6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TMEM238LA0A1B0GVL6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TMEM238LA0A1B0GVL6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TMEM238LA0A1B0GVL6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TMEM238LA0A1B0GVL6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM238LA0A1B0GVL6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM238LA0A1B0GVL6 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM238LA0A1B0GVL6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM238LA0A1B0GVL6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.39■□□□□ 0.21
TMEM238LA0A1B0GVL6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TMEM238LA0A1B0GVL6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM238LA0A1B0GVL6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM238LA0A1B0GVL6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TMEM238LA0A1B0GVL6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM238LA0A1B0GVL6 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM238LA0A1B0GVL6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM238LA0A1B0GVL6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM238LA0A1B0GVL6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM238LA0A1B0GVL6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TMEM238LA0A1B0GVL6 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM238LA0A1B0GVL6 AC127502.1-201ENST00000399971 1502 ntBASIC16.38■□□□□ 0.21
TMEM238LA0A1B0GVL6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM238LA0A1B0GVL6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM238LA0A1B0GVL6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM238LA0A1B0GVL6 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC16.37■□□□□ 0.21
TMEM238LA0A1B0GVL6 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC16.37■□□□□ 0.21
TMEM238LA0A1B0GVL6 AC138932.1-201ENST00000534164 6830 ntBASIC16.37■□□□□ 0.21
TMEM238LA0A1B0GVL6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM238LA0A1B0GVL6 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC16.37■□□□□ 0.21
TMEM238LA0A1B0GVL6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM238LA0A1B0GVL6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TMEM238LA0A1B0GVL6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM238LA0A1B0GVL6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM238LA0A1B0GVL6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TMEM238LA0A1B0GVL6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TMEM238LA0A1B0GVL6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM238LA0A1B0GVL6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM238LA0A1B0GVL6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM238LA0A1B0GVL6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM238LA0A1B0GVL6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM238LA0A1B0GVL6 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TMEM238LA0A1B0GVL6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM238LA0A1B0GVL6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM238LA0A1B0GVL6 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
TMEM238LA0A1B0GVL6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM238LA0A1B0GVL6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM238LA0A1B0GVL6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM238LA0A1B0GVL6 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TMEM238LA0A1B0GVL6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM238LA0A1B0GVL6 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM238LA0A1B0GVL6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM238LA0A1B0GVL6 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM238LA0A1B0GVL6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM238LA0A1B0GVL6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
TMEM238LA0A1B0GVL6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TMEM238LA0A1B0GVL6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM238LA0A1B0GVL6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM238LA0A1B0GVL6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM238LA0A1B0GVL6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TMEM238LA0A1B0GVL6 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM238LA0A1B0GVL6 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM238LA0A1B0GVL6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM238LA0A1B0GVL6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM238LA0A1B0GVL6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM238LA0A1B0GVL6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC16.34■□□□□ 0.21
TMEM238LA0A1B0GVL6 AC096887.2-201ENST00000623443 1957 ntBASIC16.34■□□□□ 0.21
TMEM238LA0A1B0GVL6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.34■□□□□ 0.21
TMEM238LA0A1B0GVL6 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM238LA0A1B0GVL6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM238LA0A1B0GVL6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM238LA0A1B0GVL6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM238LA0A1B0GVL6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM238LA0A1B0GVL6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM238LA0A1B0GVL6 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TMEM238LA0A1B0GVL6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC16.33■□□□□ 0.21
TMEM238LA0A1B0GVL6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TMEM238LA0A1B0GVL6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM238LA0A1B0GVL6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM238LA0A1B0GVL6 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TMEM238LA0A1B0GVL6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
TMEM238LA0A1B0GVL6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
TMEM238LA0A1B0GVL6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM238LA0A1B0GVL6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM238LA0A1B0GVL6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM238LA0A1B0GVL6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TMEM238LA0A1B0GVL6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM238LA0A1B0GVL6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
TMEM238LA0A1B0GVL6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM238LA0A1B0GVL6 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TMEM238LA0A1B0GVL6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TMEM238LA0A1B0GVL6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TMEM238LA0A1B0GVL6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms