Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
IGHV4-28A0A0C4DH34 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
IGHV4-28A0A0C4DH34 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IGHV4-28A0A0C4DH34 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
IGHV4-28A0A0C4DH34 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IGHV4-28A0A0C4DH34 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IGHV4-28A0A0C4DH34 BX664725.1-201ENST00000438252 379 ntBASIC16.94■□□□□ 0.3
IGHV4-28A0A0C4DH34 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC16.94■□□□□ 0.3
IGHV4-28A0A0C4DH34 OR2A1-AS1-204ENST00000470435 602 ntBASIC16.94■□□□□ 0.3
IGHV4-28A0A0C4DH34 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IGHV4-28A0A0C4DH34 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
IGHV4-28A0A0C4DH34 SSSCA1-AS1-201ENST00000567594 614 ntBASIC16.94■□□□□ 0.3
IGHV4-28A0A0C4DH34 MIR4281-201ENST00000580852 62 ntBASIC16.94■□□□□ 0.3
IGHV4-28A0A0C4DH34 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
IGHV4-28A0A0C4DH34 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
IGHV4-28A0A0C4DH34 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC16.94■□□□□ 0.3
IGHV4-28A0A0C4DH34 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IGHV4-28A0A0C4DH34 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IGHV4-28A0A0C4DH34 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
IGHV4-28A0A0C4DH34 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
IGHV4-28A0A0C4DH34 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC16.94■□□□□ 0.3
IGHV4-28A0A0C4DH34 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC16.93■□□□□ 0.3
IGHV4-28A0A0C4DH34 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IGHV4-28A0A0C4DH34 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
IGHV4-28A0A0C4DH34 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IGHV4-28A0A0C4DH34 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IGHV4-28A0A0C4DH34 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IGHV4-28A0A0C4DH34 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IGHV4-28A0A0C4DH34 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.93■□□□□ 0.3
IGHV4-28A0A0C4DH34 KRT125P-201ENST00000546827 989 ntBASIC16.93■□□□□ 0.3
IGHV4-28A0A0C4DH34 Z92544.1-202ENST00000571933 1220 ntBASIC16.93■□□□□ 0.3
IGHV4-28A0A0C4DH34 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IGHV4-28A0A0C4DH34 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.93■□□□□ 0.3
IGHV4-28A0A0C4DH34 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC16.93■□□□□ 0.3
IGHV4-28A0A0C4DH34 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IGHV4-28A0A0C4DH34 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IGHV4-28A0A0C4DH34 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IGHV4-28A0A0C4DH34 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
IGHV4-28A0A0C4DH34 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IGHV4-28A0A0C4DH34 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
IGHV4-28A0A0C4DH34 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IGHV4-28A0A0C4DH34 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IGHV4-28A0A0C4DH34 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
IGHV4-28A0A0C4DH34 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.92■□□□□ 0.3
IGHV4-28A0A0C4DH34 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
IGHV4-28A0A0C4DH34 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IGHV4-28A0A0C4DH34 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IGHV4-28A0A0C4DH34 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IGHV4-28A0A0C4DH34 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IGHV4-28A0A0C4DH34 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
IGHV4-28A0A0C4DH34 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
IGHV4-28A0A0C4DH34 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IGHV4-28A0A0C4DH34 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IGHV4-28A0A0C4DH34 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC16.9■□□□□ 0.3
IGHV4-28A0A0C4DH34 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IGHV4-28A0A0C4DH34 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
IGHV4-28A0A0C4DH34 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
IGHV4-28A0A0C4DH34 GUSBP5-201ENST00000418136 578 ntBASIC16.9■□□□□ 0.3
IGHV4-28A0A0C4DH34 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.9■□□□□ 0.3
IGHV4-28A0A0C4DH34 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
IGHV4-28A0A0C4DH34 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC16.9■□□□□ 0.3
IGHV4-28A0A0C4DH34 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC16.9■□□□□ 0.3
IGHV4-28A0A0C4DH34 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC16.89■□□□□ 0.3
IGHV4-28A0A0C4DH34 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
IGHV4-28A0A0C4DH34 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
IGHV4-28A0A0C4DH34 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IGHV4-28A0A0C4DH34 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
IGHV4-28A0A0C4DH34 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC16.89■□□□□ 0.29
IGHV4-28A0A0C4DH34 AC137630.3-201ENST00000607245 391 ntBASIC16.89■□□□□ 0.29
IGHV4-28A0A0C4DH34 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.89■□□□□ 0.29
IGHV4-28A0A0C4DH34 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC16.89■□□□□ 0.29
IGHV4-28A0A0C4DH34 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IGHV4-28A0A0C4DH34 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
IGHV4-28A0A0C4DH34 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IGHV4-28A0A0C4DH34 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IGHV4-28A0A0C4DH34 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC16.88■□□□□ 0.29
IGHV4-28A0A0C4DH34 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC16.88■□□□□ 0.29
IGHV4-28A0A0C4DH34 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IGHV4-28A0A0C4DH34 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC16.88■□□□□ 0.29
IGHV4-28A0A0C4DH34 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC16.88■□□□□ 0.29
IGHV4-28A0A0C4DH34 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC16.88■□□□□ 0.29
IGHV4-28A0A0C4DH34 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
IGHV4-28A0A0C4DH34 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IGHV4-28A0A0C4DH34 CEBPA-AS1-201ENST00000592982 2198 ntBASIC16.88■□□□□ 0.29
IGHV4-28A0A0C4DH34 AC090877.2-201ENST00000558441 1738 ntBASIC16.87■□□□□ 0.29
IGHV4-28A0A0C4DH34 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IGHV4-28A0A0C4DH34 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16.87■□□□□ 0.29
IGHV4-28A0A0C4DH34 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
IGHV4-28A0A0C4DH34 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.87■□□□□ 0.29
IGHV4-28A0A0C4DH34 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.87■□□□□ 0.29
IGHV4-28A0A0C4DH34 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC16.87■□□□□ 0.29
IGHV4-28A0A0C4DH34 MIR4787-201ENST00000607364 84 ntBASIC16.87■□□□□ 0.29
IGHV4-28A0A0C4DH34 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC16.87■□□□□ 0.29
IGHV4-28A0A0C4DH34 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
IGHV4-28A0A0C4DH34 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
IGHV4-28A0A0C4DH34 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
IGHV4-28A0A0C4DH34 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC16.86■□□□□ 0.29
IGHV4-28A0A0C4DH34 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
IGHV4-28A0A0C4DH34 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
IGHV4-28A0A0C4DH34 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms