Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.96■■□□□ 1.91
PCDHGB6Q9Y5F9 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
PCDHGB6Q9Y5F9 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PCDHGB6Q9Y5F9 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC26.95■■□□□ 1.9
PCDHGB6Q9Y5F9 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHGB6Q9Y5F9 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
PCDHGB6Q9Y5F9 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHGB6Q9Y5F9 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.88■■□□□ 1.89
PCDHGB6Q9Y5F9 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHGB6Q9Y5F9 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHGB6Q9Y5F9 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PCDHGB6Q9Y5F9 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PCDHGB6Q9Y5F9 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
PCDHGB6Q9Y5F9 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC26.84■■□□□ 1.89
PCDHGB6Q9Y5F9 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.88
PCDHGB6Q9Y5F9 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
PCDHGB6Q9Y5F9 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC26.8■■□□□ 1.88
PCDHGB6Q9Y5F9 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.79■■□□□ 1.88
PCDHGB6Q9Y5F9 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PCDHGB6Q9Y5F9 DYNLL1-208ENST00000550178 581 ntBASIC26.77■■□□□ 1.88
PCDHGB6Q9Y5F9 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.75■■□□□ 1.87
PCDHGB6Q9Y5F9 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.75■■□□□ 1.87
PCDHGB6Q9Y5F9 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHGB6Q9Y5F9 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHGB6Q9Y5F9 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
PCDHGB6Q9Y5F9 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
PCDHGB6Q9Y5F9 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PCDHGB6Q9Y5F9 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
PCDHGB6Q9Y5F9 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PCDHGB6Q9Y5F9 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.66■■□□□ 1.86
PCDHGB6Q9Y5F9 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHGB6Q9Y5F9 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHGB6Q9Y5F9 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
PCDHGB6Q9Y5F9 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHGB6Q9Y5F9 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC26.61■■□□□ 1.85
PCDHGB6Q9Y5F9 AL031258.1-201ENST00000623562 325 ntBASIC26.61■■□□□ 1.85
PCDHGB6Q9Y5F9 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHGB6Q9Y5F9 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.57■■□□□ 1.84
PCDHGB6Q9Y5F9 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHGB6Q9Y5F9 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.56■■□□□ 1.84
PCDHGB6Q9Y5F9 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
PCDHGB6Q9Y5F9 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PCDHGB6Q9Y5F9 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
PCDHGB6Q9Y5F9 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.52■■□□□ 1.84
PCDHGB6Q9Y5F9 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHGB6Q9Y5F9 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PCDHGB6Q9Y5F9 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.48■■□□□ 1.83
PCDHGB6Q9Y5F9 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
PCDHGB6Q9Y5F9 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PCDHGB6Q9Y5F9 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
PCDHGB6Q9Y5F9 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHGB6Q9Y5F9 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.43■■□□□ 1.82
PCDHGB6Q9Y5F9 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.43■■□□□ 1.82
PCDHGB6Q9Y5F9 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHGB6Q9Y5F9 AC145285.7-201ENST00000614819 1539 ntBASIC26.4■■□□□ 1.82
PCDHGB6Q9Y5F9 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.4■■□□□ 1.82
PCDHGB6Q9Y5F9 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.4■■□□□ 1.82
PCDHGB6Q9Y5F9 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PCDHGB6Q9Y5F9 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
PCDHGB6Q9Y5F9 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHGB6Q9Y5F9 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PCDHGB6Q9Y5F9 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.37■■□□□ 1.81
PCDHGB6Q9Y5F9 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHGB6Q9Y5F9 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.36■■□□□ 1.81
PCDHGB6Q9Y5F9 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHGB6Q9Y5F9 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC26.34■■□□□ 1.81
PCDHGB6Q9Y5F9 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC26.33■■□□□ 1.81
PCDHGB6Q9Y5F9 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.32■■□□□ 1.8
PCDHGB6Q9Y5F9 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHGB6Q9Y5F9 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
PCDHGB6Q9Y5F9 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.3■■□□□ 1.8
PCDHGB6Q9Y5F9 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHGB6Q9Y5F9 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHGB6Q9Y5F9 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHGB6Q9Y5F9 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHGB6Q9Y5F9 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
PCDHGB6Q9Y5F9 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.18■■□□□ 1.78
PCDHGB6Q9Y5F9 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC26.18■■□□□ 1.78
PCDHGB6Q9Y5F9 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHGB6Q9Y5F9 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.16■■□□□ 1.78
PCDHGB6Q9Y5F9 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHGB6Q9Y5F9 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHGB6Q9Y5F9 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHGB6Q9Y5F9 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.14■■□□□ 1.78
PCDHGB6Q9Y5F9 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHGB6Q9Y5F9 RARRES2P7-201ENST00000567349 469 ntBASIC26.13■■□□□ 1.77
PCDHGB6Q9Y5F9 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHGB6Q9Y5F9 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.12■■□□□ 1.77
PCDHGB6Q9Y5F9 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.11■■□□□ 1.77
PCDHGB6Q9Y5F9 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHGB6Q9Y5F9 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHGB6Q9Y5F9 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHGB6Q9Y5F9 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
PCDHGB6Q9Y5F9 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.04■■□□□ 1.76
PCDHGB6Q9Y5F9 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHGB6Q9Y5F9 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC26.03■■□□□ 1.76
PCDHGB6Q9Y5F9 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.03■■□□□ 1.76
PCDHGB6Q9Y5F9 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHGB6Q9Y5F9 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.01■■□□□ 1.75
PCDHGB6Q9Y5F9 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms