Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SSX2IPQ9Y2D8 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.27■■■□□ 2.6
SSX2IPQ9Y2D8 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SSX2IPQ9Y2D8 AL031258.1-201ENST00000623562 325 ntBASIC31.21■■■□□ 2.59
SSX2IPQ9Y2D8 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
SSX2IPQ9Y2D8 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SSX2IPQ9Y2D8 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC31.14■■■□□ 2.58
SSX2IPQ9Y2D8 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
SSX2IPQ9Y2D8 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SSX2IPQ9Y2D8 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.09■■■□□ 2.57
SSX2IPQ9Y2D8 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC31.08■■■□□ 2.57
SSX2IPQ9Y2D8 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.03■■■□□ 2.56
SSX2IPQ9Y2D8 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.03■■■□□ 2.56
SSX2IPQ9Y2D8 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SSX2IPQ9Y2D8 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SSX2IPQ9Y2D8 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31■■■□□ 2.55
SSX2IPQ9Y2D8 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC30.99■■■□□ 2.55
SSX2IPQ9Y2D8 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.95■■■□□ 2.55
SSX2IPQ9Y2D8 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SSX2IPQ9Y2D8 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC30.91■■■□□ 2.54
SSX2IPQ9Y2D8 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SSX2IPQ9Y2D8 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
SSX2IPQ9Y2D8 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
SSX2IPQ9Y2D8 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SSX2IPQ9Y2D8 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.83■■■□□ 2.53
SSX2IPQ9Y2D8 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
SSX2IPQ9Y2D8 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.8■■■□□ 2.52
SSX2IPQ9Y2D8 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.8■■■□□ 2.52
SSX2IPQ9Y2D8 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SSX2IPQ9Y2D8 RARRES2P7-201ENST00000567349 469 ntBASIC30.78■■■□□ 2.52
SSX2IPQ9Y2D8 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
SSX2IPQ9Y2D8 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
SSX2IPQ9Y2D8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.73■■■□□ 2.51
SSX2IPQ9Y2D8 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
SSX2IPQ9Y2D8 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC30.71■■■□□ 2.51
SSX2IPQ9Y2D8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.51
SSX2IPQ9Y2D8 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30.69■■■□□ 2.5
SSX2IPQ9Y2D8 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.67■■■□□ 2.5
SSX2IPQ9Y2D8 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.67■■■□□ 2.5
SSX2IPQ9Y2D8 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
SSX2IPQ9Y2D8 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
SSX2IPQ9Y2D8 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC30.65■■■□□ 2.5
SSX2IPQ9Y2D8 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.65■■■□□ 2.5
SSX2IPQ9Y2D8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
SSX2IPQ9Y2D8 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.63■■■□□ 2.49
SSX2IPQ9Y2D8 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.63■■■□□ 2.49
SSX2IPQ9Y2D8 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SSX2IPQ9Y2D8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC30.59■■■□□ 2.49
SSX2IPQ9Y2D8 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
SSX2IPQ9Y2D8 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC30.53■■■□□ 2.48
SSX2IPQ9Y2D8 KLF16-203ENST00000592313 508 ntTSL 3 BASIC30.53■■■□□ 2.48
SSX2IPQ9Y2D8 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.53■■■□□ 2.48
SSX2IPQ9Y2D8 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
SSX2IPQ9Y2D8 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
SSX2IPQ9Y2D8 AC097358.2-201ENST00000607541 1159 ntBASIC30.5■■■□□ 2.47
SSX2IPQ9Y2D8 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.49■■■□□ 2.47
SSX2IPQ9Y2D8 SETD8P1-201ENST00000623146 1180 ntBASIC30.48■■■□□ 2.47
SSX2IPQ9Y2D8 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.47■■■□□ 2.47
SSX2IPQ9Y2D8 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SSX2IPQ9Y2D8 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
SSX2IPQ9Y2D8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SSX2IPQ9Y2D8 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC30.42■■■□□ 2.46
SSX2IPQ9Y2D8 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.42■■■□□ 2.46
SSX2IPQ9Y2D8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.4■■■□□ 2.46
SSX2IPQ9Y2D8 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC30.38■■■□□ 2.45
SSX2IPQ9Y2D8 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
SSX2IPQ9Y2D8 AC136428.2-201ENST00000563187 214 ntBASIC30.35■■■□□ 2.45
SSX2IPQ9Y2D8 AC145285.7-201ENST00000614819 1539 ntBASIC30.32■■■□□ 2.44
SSX2IPQ9Y2D8 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
SSX2IPQ9Y2D8 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.28■■■□□ 2.44
SSX2IPQ9Y2D8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
SSX2IPQ9Y2D8 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SSX2IPQ9Y2D8 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC30.2■■■□□ 2.43
SSX2IPQ9Y2D8 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SSX2IPQ9Y2D8 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SSX2IPQ9Y2D8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SSX2IPQ9Y2D8 SUZ12P1-203ENST00000578195 985 ntBASIC30.18■■■□□ 2.42
SSX2IPQ9Y2D8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC30.17■■■□□ 2.42
SSX2IPQ9Y2D8 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC30.16■■■□□ 2.42
SSX2IPQ9Y2D8 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.16■■■□□ 2.42
SSX2IPQ9Y2D8 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SSX2IPQ9Y2D8 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
SSX2IPQ9Y2D8 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
SSX2IPQ9Y2D8 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.12■■■□□ 2.41
SSX2IPQ9Y2D8 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SSX2IPQ9Y2D8 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.11■■■□□ 2.41
SSX2IPQ9Y2D8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SSX2IPQ9Y2D8 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.1■■■□□ 2.41
SSX2IPQ9Y2D8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
SSX2IPQ9Y2D8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.09■■■□□ 2.41
SSX2IPQ9Y2D8 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SSX2IPQ9Y2D8 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SSX2IPQ9Y2D8 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SSX2IPQ9Y2D8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SSX2IPQ9Y2D8 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
SSX2IPQ9Y2D8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SSX2IPQ9Y2D8 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
SSX2IPQ9Y2D8 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC29.98■■■□□ 2.39
SSX2IPQ9Y2D8 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
SSX2IPQ9Y2D8 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC29.94■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms