Protein–RNA interactions for Protein: Q9HBM1

SPC25, Kinetochore protein Spc25, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25Q9HBM1 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
SPC25Q9HBM1 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC32.99■■■□□ 2.87
SPC25Q9HBM1 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC32.97■■■□□ 2.87
SPC25Q9HBM1 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC32.97■■■□□ 2.87
SPC25Q9HBM1 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC32.95■■■□□ 2.86
SPC25Q9HBM1 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
SPC25Q9HBM1 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC32.94■■■□□ 2.86
SPC25Q9HBM1 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC32.93■■■□□ 2.86
SPC25Q9HBM1 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC32.92■■■□□ 2.86
SPC25Q9HBM1 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
SPC25Q9HBM1 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.8■■■□□ 2.84
SPC25Q9HBM1 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC32.8■■■□□ 2.84
SPC25Q9HBM1 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
SPC25Q9HBM1 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC32.79■■■□□ 2.84
SPC25Q9HBM1 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC32.75■■■□□ 2.83
SPC25Q9HBM1 RARRES2P7-201ENST00000567349 469 ntBASIC32.75■■■□□ 2.83
SPC25Q9HBM1 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC32.73■■■□□ 2.83
SPC25Q9HBM1 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC32.73■■■□□ 2.83
SPC25Q9HBM1 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC32.69■■■□□ 2.82
SPC25Q9HBM1 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
SPC25Q9HBM1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC32.67■■■□□ 2.82
SPC25Q9HBM1 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC32.67■■■□□ 2.82
SPC25Q9HBM1 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
SPC25Q9HBM1 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.63■■■□□ 2.81
SPC25Q9HBM1 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC32.61■■■□□ 2.81
SPC25Q9HBM1 ILK-212ENST00000532063 1617 ntTSL 2 BASIC32.6■■■□□ 2.81
SPC25Q9HBM1 EBPL-203ENST00000378270 579 ntTSL 2 BASIC32.6■■■□□ 2.81
SPC25Q9HBM1 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
SPC25Q9HBM1 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC32.6■■■□□ 2.81
SPC25Q9HBM1 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC32.59■■■□□ 2.81
SPC25Q9HBM1 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC32.56■■■□□ 2.8
SPC25Q9HBM1 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC32.56■■■□□ 2.8
SPC25Q9HBM1 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC32.55■■■□□ 2.8
SPC25Q9HBM1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC32.55■■■□□ 2.8
SPC25Q9HBM1 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC32.5■■■□□ 2.79
SPC25Q9HBM1 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
SPC25Q9HBM1 AC097358.2-201ENST00000607541 1159 ntBASIC32.47■■■□□ 2.79
SPC25Q9HBM1 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
SPC25Q9HBM1 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC32.45■■■□□ 2.79
SPC25Q9HBM1 SETD8P1-201ENST00000623146 1180 ntBASIC32.41■■■□□ 2.78
SPC25Q9HBM1 KLF16-203ENST00000592313 508 ntTSL 3 BASIC32.39■■■□□ 2.78
SPC25Q9HBM1 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC32.37■■■□□ 2.77
SPC25Q9HBM1 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC32.36■■■□□ 2.77
SPC25Q9HBM1 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
SPC25Q9HBM1 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
SPC25Q9HBM1 AC136428.2-201ENST00000563187 214 ntBASIC32.29■■■□□ 2.76
SPC25Q9HBM1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
SPC25Q9HBM1 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC32.27■■■□□ 2.76
SPC25Q9HBM1 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC32.26■■■□□ 2.76
SPC25Q9HBM1 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
SPC25Q9HBM1 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
SPC25Q9HBM1 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
SPC25Q9HBM1 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC32.18■■■□□ 2.74
SPC25Q9HBM1 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
SPC25Q9HBM1 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
SPC25Q9HBM1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC32.15■■■□□ 2.74
SPC25Q9HBM1 SUZ12P1-203ENST00000578195 985 ntBASIC32.14■■■□□ 2.74
SPC25Q9HBM1 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC32.13■■■□□ 2.73
SPC25Q9HBM1 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC32.12■■■□□ 2.73
SPC25Q9HBM1 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC32.11■■■□□ 2.73
SPC25Q9HBM1 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC32.1■■■□□ 2.73
SPC25Q9HBM1 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC32.09■■■□□ 2.73
SPC25Q9HBM1 MVK-208ENST00000539696 608 ntTSL 5 BASIC32.09■■■□□ 2.73
SPC25Q9HBM1 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
SPC25Q9HBM1 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
SPC25Q9HBM1 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC32.07■■■□□ 2.72
SPC25Q9HBM1 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
SPC25Q9HBM1 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
SPC25Q9HBM1 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
SPC25Q9HBM1 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC32.02■■■□□ 2.72
SPC25Q9HBM1 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC32.02■■■□□ 2.72
SPC25Q9HBM1 RPS2P35-201ENST00000443417 897 ntBASIC32■■■□□ 2.71
SPC25Q9HBM1 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
SPC25Q9HBM1 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
SPC25Q9HBM1 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.98■■■□□ 2.71
SPC25Q9HBM1 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.98■■■□□ 2.71
SPC25Q9HBM1 AC145285.7-201ENST00000614819 1539 ntBASIC31.92■■■□□ 2.7
SPC25Q9HBM1 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
SPC25Q9HBM1 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
SPC25Q9HBM1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
SPC25Q9HBM1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
SPC25Q9HBM1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SPC25Q9HBM1 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.83■■■□□ 2.69
SPC25Q9HBM1 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
SPC25Q9HBM1 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SPC25Q9HBM1 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.78■■■□□ 2.68
SPC25Q9HBM1 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.78■■■□□ 2.68
SPC25Q9HBM1 CAHM-201ENST00000604200 896 ntBASIC31.78■■■□□ 2.68
SPC25Q9HBM1 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.68
SPC25Q9HBM1 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SPC25Q9HBM1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.73■■■□□ 2.67
SPC25Q9HBM1 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
SPC25Q9HBM1 AP006261.1-201ENST00000584783 668 ntBASIC31.68■■■□□ 2.66
SPC25Q9HBM1 AL391121.1-201ENST00000607967 1349 ntBASIC31.68■■■□□ 2.66
SPC25Q9HBM1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SPC25Q9HBM1 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SPC25Q9HBM1 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
SPC25Q9HBM1 AL133380.1-201ENST00000506013 324 ntBASIC31.63■■■□□ 2.65
SPC25Q9HBM1 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.63■■■□□ 2.65
SPC25Q9HBM1 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms