Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 AL031258.1-201ENST00000623562 325 ntBASIC30.4■■■□□ 2.46
BRD9Q9H8M2 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
BRD9Q9H8M2 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
BRD9Q9H8M2 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
BRD9Q9H8M2 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.28■■■□□ 2.44
BRD9Q9H8M2 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.28■■■□□ 2.44
BRD9Q9H8M2 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC30.25■■■□□ 2.43
BRD9Q9H8M2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
BRD9Q9H8M2 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.24■■■□□ 2.43
BRD9Q9H8M2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
BRD9Q9H8M2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.22■■■□□ 2.43
BRD9Q9H8M2 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
BRD9Q9H8M2 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
BRD9Q9H8M2 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
BRD9Q9H8M2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC30.18■■■□□ 2.42
BRD9Q9H8M2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.12■■■□□ 2.41
BRD9Q9H8M2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC30.12■■■□□ 2.41
BRD9Q9H8M2 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
BRD9Q9H8M2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.09■■■□□ 2.41
BRD9Q9H8M2 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.09■■■□□ 2.41
BRD9Q9H8M2 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30.06■■■□□ 2.4
BRD9Q9H8M2 RARRES2P7-201ENST00000567349 469 ntBASIC30.06■■■□□ 2.4
BRD9Q9H8M2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.03■■■□□ 2.4
BRD9Q9H8M2 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
BRD9Q9H8M2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.02■■■□□ 2.4
BRD9Q9H8M2 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
BRD9Q9H8M2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC29.98■■■□□ 2.39
BRD9Q9H8M2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
BRD9Q9H8M2 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC29.91■■■□□ 2.38
BRD9Q9H8M2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC29.91■■■□□ 2.38
BRD9Q9H8M2 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC29.91■■■□□ 2.38
BRD9Q9H8M2 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC29.89■■■□□ 2.38
BRD9Q9H8M2 ILK-212ENST00000532063 1617 ntTSL 2 BASIC29.89■■■□□ 2.37
BRD9Q9H8M2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.88■■■□□ 2.37
BRD9Q9H8M2 EBPL-203ENST00000378270 579 ntTSL 2 BASIC29.87■■■□□ 2.37
BRD9Q9H8M2 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.86■■■□□ 2.37
BRD9Q9H8M2 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC29.84■■■□□ 2.37
BRD9Q9H8M2 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
BRD9Q9H8M2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC29.82■■■□□ 2.36
BRD9Q9H8M2 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC29.81■■■□□ 2.36
BRD9Q9H8M2 AC097358.2-201ENST00000607541 1159 ntBASIC29.81■■■□□ 2.36
BRD9Q9H8M2 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
BRD9Q9H8M2 SETD8P1-201ENST00000623146 1180 ntBASIC29.75■■■□□ 2.35
BRD9Q9H8M2 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
BRD9Q9H8M2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
BRD9Q9H8M2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29.71■■■□□ 2.35
BRD9Q9H8M2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC29.7■■■□□ 2.35
BRD9Q9H8M2 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
BRD9Q9H8M2 AC136428.2-201ENST00000563187 214 ntBASIC29.67■■■□□ 2.34
BRD9Q9H8M2 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
BRD9Q9H8M2 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
BRD9Q9H8M2 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
BRD9Q9H8M2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC29.6■■■□□ 2.33
BRD9Q9H8M2 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC29.6■■■□□ 2.33
BRD9Q9H8M2 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.58■■■□□ 2.33
BRD9Q9H8M2 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
BRD9Q9H8M2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
BRD9Q9H8M2 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC29.54■■■□□ 2.32
BRD9Q9H8M2 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
BRD9Q9H8M2 SUZ12P1-203ENST00000578195 985 ntBASIC29.52■■■□□ 2.32
BRD9Q9H8M2 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC29.51■■■□□ 2.31
BRD9Q9H8M2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC29.5■■■□□ 2.31
BRD9Q9H8M2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
BRD9Q9H8M2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
BRD9Q9H8M2 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
BRD9Q9H8M2 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC29.48■■■□□ 2.31
BRD9Q9H8M2 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC29.47■■■□□ 2.31
BRD9Q9H8M2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC29.47■■■□□ 2.31
BRD9Q9H8M2 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC29.47■■■□□ 2.31
BRD9Q9H8M2 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC29.46■■■□□ 2.31
BRD9Q9H8M2 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
BRD9Q9H8M2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
BRD9Q9H8M2 MVK-208ENST00000539696 608 ntTSL 5 BASIC29.42■■■□□ 2.3
BRD9Q9H8M2 RPS2P35-201ENST00000443417 897 ntBASIC29.41■■■□□ 2.3
BRD9Q9H8M2 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
BRD9Q9H8M2 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
BRD9Q9H8M2 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC29.39■■■□□ 2.3
BRD9Q9H8M2 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
BRD9Q9H8M2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
BRD9Q9H8M2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC29.37■■■□□ 2.29
BRD9Q9H8M2 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.35■■■□□ 2.29
BRD9Q9H8M2 AC145285.7-201ENST00000614819 1539 ntBASIC29.34■■■□□ 2.29
BRD9Q9H8M2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC29.32■■■□□ 2.28
BRD9Q9H8M2 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC29.31■■■□□ 2.28
BRD9Q9H8M2 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
BRD9Q9H8M2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
BRD9Q9H8M2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
BRD9Q9H8M2 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.26■■■□□ 2.27
BRD9Q9H8M2 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
BRD9Q9H8M2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
BRD9Q9H8M2 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
BRD9Q9H8M2 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC29.2■■■□□ 2.26
BRD9Q9H8M2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC29.19■■■□□ 2.26
BRD9Q9H8M2 CAHM-201ENST00000604200 896 ntBASIC29.19■■■□□ 2.26
BRD9Q9H8M2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
BRD9Q9H8M2 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
BRD9Q9H8M2 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
BRD9Q9H8M2 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.25
BRD9Q9H8M2 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.13■■■□□ 2.25
BRD9Q9H8M2 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.12■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms