Protein–RNA interactions for Protein: Q9H7M6

ZSWIM4, Zinc finger SWIM domain-containing protein 4, humanhuman

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM4Q9H7M6 AP002365.1-201ENST00000603448 772 ntBASIC32.41■■■□□ 2.78
ZSWIM4Q9H7M6 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC32.4■■■□□ 2.78
ZSWIM4Q9H7M6 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
ZSWIM4Q9H7M6 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
ZSWIM4Q9H7M6 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
ZSWIM4Q9H7M6 AC145285.7-201ENST00000614819 1539 ntBASIC32.37■■■□□ 2.77
ZSWIM4Q9H7M6 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC32.37■■■□□ 2.77
ZSWIM4Q9H7M6 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
ZSWIM4Q9H7M6 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC32.34■■■□□ 2.77
ZSWIM4Q9H7M6 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC32.29■■■□□ 2.76
ZSWIM4Q9H7M6 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC32.28■■■□□ 2.76
ZSWIM4Q9H7M6 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC32.28■■■□□ 2.76
ZSWIM4Q9H7M6 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
ZSWIM4Q9H7M6 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
ZSWIM4Q9H7M6 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC32.25■■■□□ 2.75
ZSWIM4Q9H7M6 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC32.25■■■□□ 2.75
ZSWIM4Q9H7M6 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC32.25■■■□□ 2.75
ZSWIM4Q9H7M6 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
ZSWIM4Q9H7M6 DYNLL1-208ENST00000550178 581 ntBASIC32.22■■■□□ 2.75
ZSWIM4Q9H7M6 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC32.21■■■□□ 2.75
ZSWIM4Q9H7M6 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
ZSWIM4Q9H7M6 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
ZSWIM4Q9H7M6 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC32.18■■■□□ 2.74
ZSWIM4Q9H7M6 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC32.15■■■□□ 2.74
ZSWIM4Q9H7M6 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC32.15■■■□□ 2.74
ZSWIM4Q9H7M6 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
ZSWIM4Q9H7M6 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC32.14■■■□□ 2.74
ZSWIM4Q9H7M6 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC32.12■■■□□ 2.73
ZSWIM4Q9H7M6 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
ZSWIM4Q9H7M6 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
ZSWIM4Q9H7M6 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC32.11■■■□□ 2.73
ZSWIM4Q9H7M6 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC32.11■■■□□ 2.73
ZSWIM4Q9H7M6 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
ZSWIM4Q9H7M6 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
ZSWIM4Q9H7M6 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC32.09■■■□□ 2.73
ZSWIM4Q9H7M6 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
ZSWIM4Q9H7M6 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC32.07■■■□□ 2.72
ZSWIM4Q9H7M6 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC32.07■■■□□ 2.72
ZSWIM4Q9H7M6 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
ZSWIM4Q9H7M6 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC32.02■■■□□ 2.72
ZSWIM4Q9H7M6 AL031258.1-201ENST00000623562 325 ntBASIC32■■■□□ 2.71
ZSWIM4Q9H7M6 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.96■■■□□ 2.71
ZSWIM4Q9H7M6 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
ZSWIM4Q9H7M6 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC31.96■■■□□ 2.71
ZSWIM4Q9H7M6 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
ZSWIM4Q9H7M6 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.93■■■□□ 2.7
ZSWIM4Q9H7M6 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.92■■■□□ 2.7
ZSWIM4Q9H7M6 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
ZSWIM4Q9H7M6 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
ZSWIM4Q9H7M6 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
ZSWIM4Q9H7M6 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
ZSWIM4Q9H7M6 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC31.84■■■□□ 2.69
ZSWIM4Q9H7M6 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
ZSWIM4Q9H7M6 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
ZSWIM4Q9H7M6 EBPL-203ENST00000378270 579 ntTSL 2 BASIC31.75■■■□□ 2.67
ZSWIM4Q9H7M6 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
ZSWIM4Q9H7M6 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
ZSWIM4Q9H7M6 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.72■■■□□ 2.67
ZSWIM4Q9H7M6 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.67■■■□□ 2.66
ZSWIM4Q9H7M6 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
ZSWIM4Q9H7M6 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.64■■■□□ 2.66
ZSWIM4Q9H7M6 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.64■■■□□ 2.66
ZSWIM4Q9H7M6 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.63■■■□□ 2.65
ZSWIM4Q9H7M6 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
ZSWIM4Q9H7M6 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
ZSWIM4Q9H7M6 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
ZSWIM4Q9H7M6 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
ZSWIM4Q9H7M6 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.61■■■□□ 2.65
ZSWIM4Q9H7M6 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.59■■■□□ 2.65
ZSWIM4Q9H7M6 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.58■■■□□ 2.65
ZSWIM4Q9H7M6 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.58■■■□□ 2.65
ZSWIM4Q9H7M6 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.57■■■□□ 2.64
ZSWIM4Q9H7M6 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
ZSWIM4Q9H7M6 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
ZSWIM4Q9H7M6 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
ZSWIM4Q9H7M6 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ZSWIM4Q9H7M6 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ZSWIM4Q9H7M6 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
ZSWIM4Q9H7M6 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
ZSWIM4Q9H7M6 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
ZSWIM4Q9H7M6 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.48■■■□□ 2.63
ZSWIM4Q9H7M6 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
ZSWIM4Q9H7M6 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
ZSWIM4Q9H7M6 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
ZSWIM4Q9H7M6 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.46■■■□□ 2.63
ZSWIM4Q9H7M6 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.46■■■□□ 2.63
ZSWIM4Q9H7M6 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
ZSWIM4Q9H7M6 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.44■■■□□ 2.62
ZSWIM4Q9H7M6 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.44■■■□□ 2.62
ZSWIM4Q9H7M6 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
ZSWIM4Q9H7M6 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
ZSWIM4Q9H7M6 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
ZSWIM4Q9H7M6 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.37■■■□□ 2.61
ZSWIM4Q9H7M6 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.37■■■□□ 2.61
ZSWIM4Q9H7M6 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.35■■■□□ 2.61
ZSWIM4Q9H7M6 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
ZSWIM4Q9H7M6 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.34■■■□□ 2.61
ZSWIM4Q9H7M6 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.34■■■□□ 2.61
ZSWIM4Q9H7M6 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
ZSWIM4Q9H7M6 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.33■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms