Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
CNTNAP3BQ96NU0 AC136428.2-201ENST00000563187 214 ntBASIC28.61■■■□□ 2.17
CNTNAP3BQ96NU0 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CNTNAP3BQ96NU0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
CNTNAP3BQ96NU0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CNTNAP3BQ96NU0 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
CNTNAP3BQ96NU0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
CNTNAP3BQ96NU0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC28.51■■■□□ 2.15
CNTNAP3BQ96NU0 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
CNTNAP3BQ96NU0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
CNTNAP3BQ96NU0 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC28.48■■■□□ 2.15
CNTNAP3BQ96NU0 MIR7108-201ENST00000614319 87 ntBASIC28.47■■■□□ 2.15
CNTNAP3BQ96NU0 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC28.46■■■□□ 2.15
CNTNAP3BQ96NU0 SETD8P1-201ENST00000623146 1180 ntBASIC28.43■■■□□ 2.14
CNTNAP3BQ96NU0 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CNTNAP3BQ96NU0 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC28.4■■■□□ 2.14
CNTNAP3BQ96NU0 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC28.39■■■□□ 2.14
CNTNAP3BQ96NU0 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
CNTNAP3BQ96NU0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.36■■■□□ 2.13
CNTNAP3BQ96NU0 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
CNTNAP3BQ96NU0 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CNTNAP3BQ96NU0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.32■■■□□ 2.12
CNTNAP3BQ96NU0 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC28.31■■■□□ 2.12
CNTNAP3BQ96NU0 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
CNTNAP3BQ96NU0 HLA-V-202ENST00000446817 847 ntBASIC28.3■■■□□ 2.12
CNTNAP3BQ96NU0 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC28.3■■■□□ 2.12
CNTNAP3BQ96NU0 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CNTNAP3BQ96NU0 AL162393.1-201ENST00000437852 946 ntBASIC28.29■■■□□ 2.12
CNTNAP3BQ96NU0 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CNTNAP3BQ96NU0 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CNTNAP3BQ96NU0 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC28.28■■■□□ 2.12
CNTNAP3BQ96NU0 ABHD17AP4-201ENST00000411545 909 ntBASIC28.25■■■□□ 2.11
CNTNAP3BQ96NU0 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC28.24■■■□□ 2.11
CNTNAP3BQ96NU0 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC28.22■■■□□ 2.11
CNTNAP3BQ96NU0 HES6-203ENST00000409160 1600 ntTSL 2 BASIC28.2■■■□□ 2.1
CNTNAP3BQ96NU0 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CNTNAP3BQ96NU0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CNTNAP3BQ96NU0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC28.14■■■□□ 2.1
CNTNAP3BQ96NU0 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC28.12■■■□□ 2.09
CNTNAP3BQ96NU0 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC28.11■■■□□ 2.09
CNTNAP3BQ96NU0 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
CNTNAP3BQ96NU0 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CNTNAP3BQ96NU0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
CNTNAP3BQ96NU0 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CNTNAP3BQ96NU0 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC28.06■■■□□ 2.08
CNTNAP3BQ96NU0 AP006261.1-201ENST00000584783 668 ntBASIC28.05■■■□□ 2.08
CNTNAP3BQ96NU0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CNTNAP3BQ96NU0 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CNTNAP3BQ96NU0 KLF16-203ENST00000592313 508 ntTSL 3 BASIC28.02■■■□□ 2.08
CNTNAP3BQ96NU0 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC27.99■■■□□ 2.07
CNTNAP3BQ96NU0 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
CNTNAP3BQ96NU0 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
CNTNAP3BQ96NU0 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
CNTNAP3BQ96NU0 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC27.94■■■□□ 2.06
CNTNAP3BQ96NU0 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC27.94■■■□□ 2.06
CNTNAP3BQ96NU0 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC27.92■■■□□ 2.06
CNTNAP3BQ96NU0 MLEC-202ENST00000412616 841 ntTSL 3 BASIC27.91■■■□□ 2.06
CNTNAP3BQ96NU0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC27.89■■■□□ 2.06
CNTNAP3BQ96NU0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC27.88■■■□□ 2.05
CNTNAP3BQ96NU0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.87■■■□□ 2.05
CNTNAP3BQ96NU0 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC27.87■■■□□ 2.05
CNTNAP3BQ96NU0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
CNTNAP3BQ96NU0 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
CNTNAP3BQ96NU0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC27.86■■■□□ 2.05
CNTNAP3BQ96NU0 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.85■■■□□ 2.05
CNTNAP3BQ96NU0 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
CNTNAP3BQ96NU0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC27.83■■■□□ 2.05
CNTNAP3BQ96NU0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.81■■■□□ 2.04
CNTNAP3BQ96NU0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC27.8■■■□□ 2.04
CNTNAP3BQ96NU0 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC27.79■■■□□ 2.04
CNTNAP3BQ96NU0 CAHM-201ENST00000604200 896 ntBASIC27.78■■■□□ 2.04
CNTNAP3BQ96NU0 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CNTNAP3BQ96NU0 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CNTNAP3BQ96NU0 EBPL-203ENST00000378270 579 ntTSL 2 BASIC27.72■■■□□ 2.03
CNTNAP3BQ96NU0 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.71■■■□□ 2.03
CNTNAP3BQ96NU0 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC27.7■■■□□ 2.02
CNTNAP3BQ96NU0 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC27.69■■■□□ 2.02
CNTNAP3BQ96NU0 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CNTNAP3BQ96NU0 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
CNTNAP3BQ96NU0 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.6■■■□□ 2.01
CNTNAP3BQ96NU0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC27.6■■■□□ 2.01
CNTNAP3BQ96NU0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC27.58■■■□□ 2.01
CNTNAP3BQ96NU0 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CNTNAP3BQ96NU0 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CNTNAP3BQ96NU0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
CNTNAP3BQ96NU0 MIR3665-201ENST00000578708 105 ntBASIC27.56■■■□□ 2
CNTNAP3BQ96NU0 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
CNTNAP3BQ96NU0 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC27.55■■■□□ 2
CNTNAP3BQ96NU0 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC27.54■■■□□ 2
CNTNAP3BQ96NU0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC27.53■■■□□ 2
CNTNAP3BQ96NU0 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC27.53■■■□□ 2
CNTNAP3BQ96NU0 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC27.53■■■□□ 2
CNTNAP3BQ96NU0 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC27.53■■■□□ 2
CNTNAP3BQ96NU0 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
CNTNAP3BQ96NU0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.53■■■□□ 2
CNTNAP3BQ96NU0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.52■■■□□ 2
CNTNAP3BQ96NU0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.52■■■□□ 2
CNTNAP3BQ96NU0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC27.52■■■□□ 2
CNTNAP3BQ96NU0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
CNTNAP3BQ96NU0 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC27.5■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms