Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
RNF139Q8WU17 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
RNF139Q8WU17 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.22■■■□□ 2.43
RNF139Q8WU17 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC30.22■■■□□ 2.43
RNF139Q8WU17 AC145285.7-201ENST00000614819 1539 ntBASIC30.21■■■□□ 2.43
RNF139Q8WU17 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.19■■■□□ 2.42
RNF139Q8WU17 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RNF139Q8WU17 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.19■■■□□ 2.42
RNF139Q8WU17 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.18■■■□□ 2.42
RNF139Q8WU17 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.17■■■□□ 2.42
RNF139Q8WU17 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
RNF139Q8WU17 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.16■■■□□ 2.42
RNF139Q8WU17 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.15■■■□□ 2.42
RNF139Q8WU17 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
RNF139Q8WU17 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
RNF139Q8WU17 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
RNF139Q8WU17 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RNF139Q8WU17 DYNLL1-208ENST00000550178 581 ntBASIC30.1■■■□□ 2.41
RNF139Q8WU17 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC30.08■■■□□ 2.41
RNF139Q8WU17 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.07■■■□□ 2.4
RNF139Q8WU17 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.06■■■□□ 2.4
RNF139Q8WU17 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.05■■■□□ 2.4
RNF139Q8WU17 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.04■■■□□ 2.4
RNF139Q8WU17 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
RNF139Q8WU17 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
RNF139Q8WU17 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.02■■■□□ 2.4
RNF139Q8WU17 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.02■■■□□ 2.4
RNF139Q8WU17 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
RNF139Q8WU17 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC29.98■■■□□ 2.39
RNF139Q8WU17 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
RNF139Q8WU17 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
RNF139Q8WU17 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC29.96■■■□□ 2.39
RNF139Q8WU17 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC29.95■■■□□ 2.38
RNF139Q8WU17 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC29.93■■■□□ 2.38
RNF139Q8WU17 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
RNF139Q8WU17 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
RNF139Q8WU17 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC29.89■■■□□ 2.38
RNF139Q8WU17 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.88■■■□□ 2.37
RNF139Q8WU17 AL031258.1-201ENST00000623562 325 ntBASIC29.87■■■□□ 2.37
RNF139Q8WU17 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
RNF139Q8WU17 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
RNF139Q8WU17 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
RNF139Q8WU17 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC29.79■■■□□ 2.36
RNF139Q8WU17 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
RNF139Q8WU17 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
RNF139Q8WU17 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
RNF139Q8WU17 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC29.73■■■□□ 2.35
RNF139Q8WU17 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
RNF139Q8WU17 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
RNF139Q8WU17 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC29.66■■■□□ 2.34
RNF139Q8WU17 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
RNF139Q8WU17 EBPL-203ENST00000378270 579 ntTSL 2 BASIC29.63■■■□□ 2.33
RNF139Q8WU17 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC29.62■■■□□ 2.33
RNF139Q8WU17 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC29.6■■■□□ 2.33
RNF139Q8WU17 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC29.6■■■□□ 2.33
RNF139Q8WU17 MVK-208ENST00000539696 608 ntTSL 5 BASIC29.59■■■□□ 2.33
RNF139Q8WU17 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC29.59■■■□□ 2.33
RNF139Q8WU17 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC29.59■■■□□ 2.33
RNF139Q8WU17 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC29.59■■■□□ 2.33
RNF139Q8WU17 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC29.56■■■□□ 2.32
RNF139Q8WU17 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
RNF139Q8WU17 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC29.55■■■□□ 2.32
RNF139Q8WU17 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
RNF139Q8WU17 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RNF139Q8WU17 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RNF139Q8WU17 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RNF139Q8WU17 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RNF139Q8WU17 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
RNF139Q8WU17 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
RNF139Q8WU17 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC29.48■■■□□ 2.31
RNF139Q8WU17 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RNF139Q8WU17 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC29.48■■■□□ 2.31
RNF139Q8WU17 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RNF139Q8WU17 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC29.48■■■□□ 2.31
RNF139Q8WU17 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
RNF139Q8WU17 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
RNF139Q8WU17 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC29.42■■■□□ 2.3
RNF139Q8WU17 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
RNF139Q8WU17 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
RNF139Q8WU17 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
RNF139Q8WU17 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.39■■■□□ 2.3
RNF139Q8WU17 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.36■■■□□ 2.29
RNF139Q8WU17 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
RNF139Q8WU17 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC29.35■■■□□ 2.29
RNF139Q8WU17 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RNF139Q8WU17 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RNF139Q8WU17 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
RNF139Q8WU17 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
RNF139Q8WU17 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.32■■■□□ 2.28
RNF139Q8WU17 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC29.31■■■□□ 2.28
RNF139Q8WU17 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC29.29■■■□□ 2.28
RNF139Q8WU17 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
RNF139Q8WU17 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC29.26■■■□□ 2.27
RNF139Q8WU17 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
RNF139Q8WU17 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
RNF139Q8WU17 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
RNF139Q8WU17 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
RNF139Q8WU17 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.24■■■□□ 2.27
RNF139Q8WU17 RARRES2P7-201ENST00000567349 469 ntBASIC29.22■■■□□ 2.27
RNF139Q8WU17 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms