Protein–RNA interactions for Protein: Q8TCZ7

LINC00308, Putative uncharacterized protein encoded by LINC00308, humanhuman

Predictions only

Length 52 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00308Q8TCZ7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC00308Q8TCZ7 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LINC00308Q8TCZ7 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
LINC00308Q8TCZ7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LINC00308Q8TCZ7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC00308Q8TCZ7 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LINC00308Q8TCZ7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC00308Q8TCZ7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC00308Q8TCZ7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC00308Q8TCZ7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC00308Q8TCZ7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.24■□□□□ 0.67
LINC00308Q8TCZ7 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
LINC00308Q8TCZ7 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
LINC00308Q8TCZ7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
LINC00308Q8TCZ7 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LINC00308Q8TCZ7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LINC00308Q8TCZ7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC00308Q8TCZ7 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC19.19■□□□□ 0.66
LINC00308Q8TCZ7 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
LINC00308Q8TCZ7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LINC00308Q8TCZ7 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
LINC00308Q8TCZ7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LINC00308Q8TCZ7 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LINC00308Q8TCZ7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LINC00308Q8TCZ7 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC00308Q8TCZ7 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC00308Q8TCZ7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC00308Q8TCZ7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC19.12■□□□□ 0.65
LINC00308Q8TCZ7 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC00308Q8TCZ7 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
LINC00308Q8TCZ7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00308Q8TCZ7 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC19.1■□□□□ 0.65
LINC00308Q8TCZ7 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00308Q8TCZ7 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC00308Q8TCZ7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.09■□□□□ 0.65
LINC00308Q8TCZ7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
LINC00308Q8TCZ7 AC145285.7-201ENST00000614819 1539 ntBASIC19.08■□□□□ 0.64
LINC00308Q8TCZ7 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC00308Q8TCZ7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
LINC00308Q8TCZ7 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINC00308Q8TCZ7 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LINC00308Q8TCZ7 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC19.02■□□□□ 0.64
LINC00308Q8TCZ7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LINC00308Q8TCZ7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
LINC00308Q8TCZ7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LINC00308Q8TCZ7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LINC00308Q8TCZ7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LINC00308Q8TCZ7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC18.97■□□□□ 0.63
LINC00308Q8TCZ7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC00308Q8TCZ7 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
LINC00308Q8TCZ7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LINC00308Q8TCZ7 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC18.93■□□□□ 0.62
LINC00308Q8TCZ7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC00308Q8TCZ7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC00308Q8TCZ7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LINC00308Q8TCZ7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC18.89■□□□□ 0.61
LINC00308Q8TCZ7 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LINC00308Q8TCZ7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC00308Q8TCZ7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC00308Q8TCZ7 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00308Q8TCZ7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00308Q8TCZ7 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LINC00308Q8TCZ7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LINC00308Q8TCZ7 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LINC00308Q8TCZ7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LINC00308Q8TCZ7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LINC00308Q8TCZ7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC00308Q8TCZ7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC00308Q8TCZ7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LINC00308Q8TCZ7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC00308Q8TCZ7 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC00308Q8TCZ7 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC00308Q8TCZ7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00308Q8TCZ7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00308Q8TCZ7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00308Q8TCZ7 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00308Q8TCZ7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
LINC00308Q8TCZ7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
LINC00308Q8TCZ7 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00308Q8TCZ7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00308Q8TCZ7 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC18.75■□□□□ 0.59
LINC00308Q8TCZ7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00308Q8TCZ7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC00308Q8TCZ7 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC18.73■□□□□ 0.59
LINC00308Q8TCZ7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00308Q8TCZ7 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00308Q8TCZ7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00308Q8TCZ7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00308Q8TCZ7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00308Q8TCZ7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC18.7■□□□□ 0.58
LINC00308Q8TCZ7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LINC00308Q8TCZ7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
LINC00308Q8TCZ7 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LINC00308Q8TCZ7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LINC00308Q8TCZ7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LINC00308Q8TCZ7 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC00308Q8TCZ7 ABCB10P1-201ENST00000614297 2181 ntBASIC18.64■□□□□ 0.57
LINC00308Q8TCZ7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC00308Q8TCZ7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC00308Q8TCZ7 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms