Protein–RNA interactions for Protein: Q8NER1

TRPV1, Transient receptor potential cation channel subfamily V member 1, humanhuman

Predictions only

Length 839 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1Q8NER1 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC33.37■■■□□ 2.93
TRPV1Q8NER1 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
TRPV1Q8NER1 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC33.35■■■□□ 2.93
TRPV1Q8NER1 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC33.32■■■□□ 2.92
TRPV1Q8NER1 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC33.32■■■□□ 2.92
TRPV1Q8NER1 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC33.3■■■□□ 2.92
TRPV1Q8NER1 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC33.3■■■□□ 2.92
TRPV1Q8NER1 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC33.3■■■□□ 2.92
TRPV1Q8NER1 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC33.28■■■□□ 2.92
TRPV1Q8NER1 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC33.26■■■□□ 2.91
TRPV1Q8NER1 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC33.26■■■□□ 2.91
TRPV1Q8NER1 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC33.25■■■□□ 2.91
TRPV1Q8NER1 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
TRPV1Q8NER1 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC33.24■■■□□ 2.91
TRPV1Q8NER1 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC33.23■■■□□ 2.91
TRPV1Q8NER1 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
TRPV1Q8NER1 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC33.2■■■□□ 2.91
TRPV1Q8NER1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC33.13■■■□□ 2.89
TRPV1Q8NER1 RARRES2P7-201ENST00000567349 469 ntBASIC33.1■■■□□ 2.89
TRPV1Q8NER1 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC33.07■■■□□ 2.88
TRPV1Q8NER1 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
TRPV1Q8NER1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC33.06■■■□□ 2.88
TRPV1Q8NER1 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
TRPV1Q8NER1 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC33■■■□□ 2.87
TRPV1Q8NER1 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC32.91■■■□□ 2.86
TRPV1Q8NER1 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.9■■■□□ 2.86
TRPV1Q8NER1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
TRPV1Q8NER1 AC097358.2-201ENST00000607541 1159 ntBASIC32.89■■■□□ 2.86
TRPV1Q8NER1 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.85
TRPV1Q8NER1 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC32.87■■■□□ 2.85
TRPV1Q8NER1 AC136428.2-201ENST00000563187 214 ntBASIC32.86■■■□□ 2.85
TRPV1Q8NER1 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC32.84■■■□□ 2.85
TRPV1Q8NER1 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC32.83■■■□□ 2.85
TRPV1Q8NER1 EBPL-203ENST00000378270 579 ntTSL 2 BASIC32.83■■■□□ 2.85
TRPV1Q8NER1 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
TRPV1Q8NER1 SETD8P1-201ENST00000623146 1180 ntBASIC32.78■■■□□ 2.84
TRPV1Q8NER1 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
TRPV1Q8NER1 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC32.76■■■□□ 2.83
TRPV1Q8NER1 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC32.74■■■□□ 2.83
TRPV1Q8NER1 SUZ12P1-203ENST00000578195 985 ntBASIC32.73■■■□□ 2.83
TRPV1Q8NER1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC32.71■■■□□ 2.83
TRPV1Q8NER1 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
TRPV1Q8NER1 KLF16-203ENST00000592313 508 ntTSL 3 BASIC32.69■■■□□ 2.82
TRPV1Q8NER1 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC32.68■■■□□ 2.82
TRPV1Q8NER1 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
TRPV1Q8NER1 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC32.66■■■□□ 2.82
TRPV1Q8NER1 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC32.64■■■□□ 2.82
TRPV1Q8NER1 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
TRPV1Q8NER1 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC32.62■■■□□ 2.81
TRPV1Q8NER1 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC32.62■■■□□ 2.81
TRPV1Q8NER1 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
TRPV1Q8NER1 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
TRPV1Q8NER1 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC32.61■■■□□ 2.81
TRPV1Q8NER1 RPS2P35-201ENST00000443417 897 ntBASIC32.59■■■□□ 2.81
TRPV1Q8NER1 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
TRPV1Q8NER1 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC32.58■■■□□ 2.81
TRPV1Q8NER1 ILK-212ENST00000532063 1617 ntTSL 2 BASIC32.58■■■□□ 2.81
TRPV1Q8NER1 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC32.51■■■□□ 2.79
TRPV1Q8NER1 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
TRPV1Q8NER1 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC32.49■■■□□ 2.79
TRPV1Q8NER1 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC32.44■■■□□ 2.78
TRPV1Q8NER1 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC32.44■■■□□ 2.78
TRPV1Q8NER1 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC32.43■■■□□ 2.78
TRPV1Q8NER1 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC32.42■■■□□ 2.78
TRPV1Q8NER1 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
TRPV1Q8NER1 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
TRPV1Q8NER1 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
TRPV1Q8NER1 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
TRPV1Q8NER1 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC32.37■■■□□ 2.77
TRPV1Q8NER1 AC145285.7-201ENST00000614819 1539 ntBASIC32.35■■■□□ 2.77
TRPV1Q8NER1 CAHM-201ENST00000604200 896 ntBASIC32.31■■■□□ 2.76
TRPV1Q8NER1 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
TRPV1Q8NER1 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC32.29■■■□□ 2.76
TRPV1Q8NER1 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC32.25■■■□□ 2.75
TRPV1Q8NER1 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC32.23■■■□□ 2.75
TRPV1Q8NER1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC32.22■■■□□ 2.75
TRPV1Q8NER1 MVK-208ENST00000539696 608 ntTSL 5 BASIC32.22■■■□□ 2.75
TRPV1Q8NER1 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
TRPV1Q8NER1 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
TRPV1Q8NER1 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
TRPV1Q8NER1 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC32.16■■■□□ 2.74
TRPV1Q8NER1 NRG1-221ENST00000614767 762 ntTSL 5 BASIC32.14■■■□□ 2.74
TRPV1Q8NER1 AL162393.1-201ENST00000437852 946 ntBASIC32.13■■■□□ 2.73
TRPV1Q8NER1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
TRPV1Q8NER1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
TRPV1Q8NER1 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
TRPV1Q8NER1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
TRPV1Q8NER1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
TRPV1Q8NER1 AL391121.1-201ENST00000607967 1349 ntBASIC32.07■■■□□ 2.72
TRPV1Q8NER1 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
TRPV1Q8NER1 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
TRPV1Q8NER1 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC32.05■■■□□ 2.72
TRPV1Q8NER1 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
TRPV1Q8NER1 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
TRPV1Q8NER1 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
TRPV1Q8NER1 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
TRPV1Q8NER1 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC32.01■■■□□ 2.71
TRPV1Q8NER1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC32■■■□□ 2.71
TRPV1Q8NER1 AL133380.1-201ENST00000506013 324 ntBASIC32■■■□□ 2.71
TRPV1Q8NER1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms