Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
TTC39CQ8N584 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
TTC39CQ8N584 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
TTC39CQ8N584 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.78■■■□□ 2.52
TTC39CQ8N584 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
TTC39CQ8N584 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC30.72■■■□□ 2.51
TTC39CQ8N584 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
TTC39CQ8N584 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC30.7■■■□□ 2.51
TTC39CQ8N584 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.7■■■□□ 2.51
TTC39CQ8N584 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
TTC39CQ8N584 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.68■■■□□ 2.5
TTC39CQ8N584 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TTC39CQ8N584 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
TTC39CQ8N584 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
TTC39CQ8N584 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.63■■■□□ 2.49
TTC39CQ8N584 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
TTC39CQ8N584 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
TTC39CQ8N584 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
TTC39CQ8N584 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.59■■■□□ 2.49
TTC39CQ8N584 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
TTC39CQ8N584 AP002365.1-201ENST00000603448 772 ntBASIC30.56■■■□□ 2.48
TTC39CQ8N584 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
TTC39CQ8N584 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
TTC39CQ8N584 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.5■■■□□ 2.47
TTC39CQ8N584 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.5■■■□□ 2.47
TTC39CQ8N584 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
TTC39CQ8N584 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
TTC39CQ8N584 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.44■■■□□ 2.46
TTC39CQ8N584 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
TTC39CQ8N584 DYNLL1-208ENST00000550178 581 ntBASIC30.44■■■□□ 2.46
TTC39CQ8N584 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
TTC39CQ8N584 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.42■■■□□ 2.46
TTC39CQ8N584 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.39■■■□□ 2.46
TTC39CQ8N584 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
TTC39CQ8N584 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.37■■■□□ 2.45
TTC39CQ8N584 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
TTC39CQ8N584 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.35■■■□□ 2.45
TTC39CQ8N584 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.34■■■□□ 2.45
TTC39CQ8N584 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
TTC39CQ8N584 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.3■■■□□ 2.44
TTC39CQ8N584 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
TTC39CQ8N584 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TTC39CQ8N584 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.28■■■□□ 2.44
TTC39CQ8N584 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.25■■■□□ 2.43
TTC39CQ8N584 AL031258.1-201ENST00000623562 325 ntBASIC30.24■■■□□ 2.43
TTC39CQ8N584 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.22■■■□□ 2.43
TTC39CQ8N584 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
TTC39CQ8N584 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
TTC39CQ8N584 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.21■■■□□ 2.43
TTC39CQ8N584 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
TTC39CQ8N584 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.2■■■□□ 2.43
TTC39CQ8N584 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC30.19■■■□□ 2.42
TTC39CQ8N584 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.19■■■□□ 2.42
TTC39CQ8N584 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
TTC39CQ8N584 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
TTC39CQ8N584 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.13■■■□□ 2.41
TTC39CQ8N584 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
TTC39CQ8N584 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
TTC39CQ8N584 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
TTC39CQ8N584 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.07■■■□□ 2.4
TTC39CQ8N584 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
TTC39CQ8N584 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC30.06■■■□□ 2.4
TTC39CQ8N584 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
TTC39CQ8N584 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
TTC39CQ8N584 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.04■■■□□ 2.4
TTC39CQ8N584 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.04■■■□□ 2.4
TTC39CQ8N584 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.04■■■□□ 2.4
TTC39CQ8N584 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
TTC39CQ8N584 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
TTC39CQ8N584 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.99■■■□□ 2.39
TTC39CQ8N584 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
TTC39CQ8N584 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
TTC39CQ8N584 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC29.95■■■□□ 2.39
TTC39CQ8N584 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.38
TTC39CQ8N584 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
TTC39CQ8N584 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC29.94■■■□□ 2.38
TTC39CQ8N584 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.92■■■□□ 2.38
TTC39CQ8N584 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC29.91■■■□□ 2.38
TTC39CQ8N584 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
TTC39CQ8N584 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC29.89■■■□□ 2.38
TTC39CQ8N584 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC29.89■■■□□ 2.38
TTC39CQ8N584 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
TTC39CQ8N584 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
TTC39CQ8N584 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
TTC39CQ8N584 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
TTC39CQ8N584 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC29.81■■■□□ 2.36
TTC39CQ8N584 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
TTC39CQ8N584 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
TTC39CQ8N584 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
TTC39CQ8N584 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
TTC39CQ8N584 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
TTC39CQ8N584 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
TTC39CQ8N584 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
TTC39CQ8N584 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.77■■■□□ 2.36
TTC39CQ8N584 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC29.77■■■□□ 2.36
TTC39CQ8N584 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
TTC39CQ8N584 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
TTC39CQ8N584 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC29.74■■■□□ 2.35
TTC39CQ8N584 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
TTC39CQ8N584 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC29.72■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms