Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
PGBD3Q8N328 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC29.62■■■□□ 2.33
PGBD3Q8N328 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
PGBD3Q8N328 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
PGBD3Q8N328 AL031258.1-201ENST00000623562 325 ntBASIC29.57■■■□□ 2.32
PGBD3Q8N328 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
PGBD3Q8N328 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC29.49■■■□□ 2.31
PGBD3Q8N328 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC29.49■■■□□ 2.31
PGBD3Q8N328 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
PGBD3Q8N328 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
PGBD3Q8N328 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC29.46■■■□□ 2.31
PGBD3Q8N328 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC29.46■■■□□ 2.31
PGBD3Q8N328 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC29.45■■■□□ 2.31
PGBD3Q8N328 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
PGBD3Q8N328 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
PGBD3Q8N328 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC29.37■■■□□ 2.29
PGBD3Q8N328 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
PGBD3Q8N328 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
PGBD3Q8N328 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC29.34■■■□□ 2.29
PGBD3Q8N328 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
PGBD3Q8N328 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
PGBD3Q8N328 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC29.27■■■□□ 2.28
PGBD3Q8N328 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC29.26■■■□□ 2.27
PGBD3Q8N328 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC29.26■■■□□ 2.27
PGBD3Q8N328 ILK-212ENST00000532063 1617 ntTSL 2 BASIC29.25■■■□□ 2.27
PGBD3Q8N328 RARRES2P7-201ENST00000567349 469 ntBASIC29.25■■■□□ 2.27
PGBD3Q8N328 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC29.24■■■□□ 2.27
PGBD3Q8N328 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC29.23■■■□□ 2.27
PGBD3Q8N328 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC29.22■■■□□ 2.27
PGBD3Q8N328 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
PGBD3Q8N328 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC29.18■■■□□ 2.26
PGBD3Q8N328 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
PGBD3Q8N328 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC29.17■■■□□ 2.26
PGBD3Q8N328 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC29.17■■■□□ 2.26
PGBD3Q8N328 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC29.16■■■□□ 2.26
PGBD3Q8N328 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
PGBD3Q8N328 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.14■■■□□ 2.26
PGBD3Q8N328 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC29.12■■■□□ 2.25
PGBD3Q8N328 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.1■■■□□ 2.25
PGBD3Q8N328 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC29.1■■■□□ 2.25
PGBD3Q8N328 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.1■■■□□ 2.25
PGBD3Q8N328 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC29.07■■■□□ 2.24
PGBD3Q8N328 EBPL-203ENST00000378270 579 ntTSL 2 BASIC29.06■■■□□ 2.24
PGBD3Q8N328 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
PGBD3Q8N328 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.05■■■□□ 2.24
PGBD3Q8N328 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
PGBD3Q8N328 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC29■■■□□ 2.23
PGBD3Q8N328 AC097358.2-201ENST00000607541 1159 ntBASIC28.99■■■□□ 2.23
PGBD3Q8N328 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
PGBD3Q8N328 SETD8P1-201ENST00000623146 1180 ntBASIC28.94■■■□□ 2.22
PGBD3Q8N328 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC28.93■■■□□ 2.22
PGBD3Q8N328 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC28.92■■■□□ 2.22
PGBD3Q8N328 KLF16-203ENST00000592313 508 ntTSL 3 BASIC28.92■■■□□ 2.22
PGBD3Q8N328 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
PGBD3Q8N328 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
PGBD3Q8N328 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC28.91■■■□□ 2.22
PGBD3Q8N328 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
PGBD3Q8N328 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PGBD3Q8N328 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC28.82■■■□□ 2.2
PGBD3Q8N328 AC136428.2-201ENST00000563187 214 ntBASIC28.79■■■□□ 2.2
PGBD3Q8N328 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC28.77■■■□□ 2.2
PGBD3Q8N328 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC28.77■■■□□ 2.2
PGBD3Q8N328 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
PGBD3Q8N328 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
PGBD3Q8N328 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
PGBD3Q8N328 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC28.74■■■□□ 2.19
PGBD3Q8N328 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
PGBD3Q8N328 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
PGBD3Q8N328 MVK-208ENST00000539696 608 ntTSL 5 BASIC28.71■■■□□ 2.19
PGBD3Q8N328 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC28.68■■■□□ 2.18
PGBD3Q8N328 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC28.68■■■□□ 2.18
PGBD3Q8N328 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC28.68■■■□□ 2.18
PGBD3Q8N328 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC28.67■■■□□ 2.18
PGBD3Q8N328 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC28.67■■■□□ 2.18
PGBD3Q8N328 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
PGBD3Q8N328 SUZ12P1-203ENST00000578195 985 ntBASIC28.64■■■□□ 2.18
PGBD3Q8N328 AC145285.7-201ENST00000614819 1539 ntBASIC28.64■■■□□ 2.17
PGBD3Q8N328 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC28.62■■■□□ 2.17
PGBD3Q8N328 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
PGBD3Q8N328 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
PGBD3Q8N328 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
PGBD3Q8N328 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
PGBD3Q8N328 RPS2P35-201ENST00000443417 897 ntBASIC28.56■■■□□ 2.16
PGBD3Q8N328 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PGBD3Q8N328 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC28.55■■■□□ 2.16
PGBD3Q8N328 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC28.54■■■□□ 2.16
PGBD3Q8N328 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
PGBD3Q8N328 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC28.52■■■□□ 2.16
PGBD3Q8N328 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC28.52■■■□□ 2.16
PGBD3Q8N328 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
PGBD3Q8N328 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
PGBD3Q8N328 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
PGBD3Q8N328 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
PGBD3Q8N328 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PGBD3Q8N328 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
PGBD3Q8N328 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
PGBD3Q8N328 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC28.44■■■□□ 2.14
PGBD3Q8N328 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PGBD3Q8N328 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PGBD3Q8N328 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms