Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AL031258.1-201ENST00000623562 325 ntBASIC31.05■■■□□ 2.56
RNF135Q8IUD6 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC31.04■■■□□ 2.56
RNF135Q8IUD6 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RNF135Q8IUD6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.04■■■□□ 2.56
RNF135Q8IUD6 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
RNF135Q8IUD6 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
RNF135Q8IUD6 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.01■■■□□ 2.55
RNF135Q8IUD6 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31■■■□□ 2.55
RNF135Q8IUD6 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31■■■□□ 2.55
RNF135Q8IUD6 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
RNF135Q8IUD6 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC30.96■■■□□ 2.55
RNF135Q8IUD6 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.93■■■□□ 2.54
RNF135Q8IUD6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.91■■■□□ 2.54
RNF135Q8IUD6 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
RNF135Q8IUD6 RARRES2P7-201ENST00000567349 469 ntBASIC30.88■■■□□ 2.53
RNF135Q8IUD6 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.84■■■□□ 2.53
RNF135Q8IUD6 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
RNF135Q8IUD6 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.8■■■□□ 2.52
RNF135Q8IUD6 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
RNF135Q8IUD6 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
RNF135Q8IUD6 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
RNF135Q8IUD6 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
RNF135Q8IUD6 AC097358.2-201ENST00000607541 1159 ntBASIC30.71■■■□□ 2.51
RNF135Q8IUD6 RPS2P35-201ENST00000443417 897 ntBASIC30.69■■■□□ 2.5
RNF135Q8IUD6 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.69■■■□□ 2.5
RNF135Q8IUD6 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
RNF135Q8IUD6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
RNF135Q8IUD6 AC136428.2-201ENST00000563187 214 ntBASIC30.56■■■□□ 2.48
RNF135Q8IUD6 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC30.55■■■□□ 2.48
RNF135Q8IUD6 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
RNF135Q8IUD6 SUZ12P1-203ENST00000578195 985 ntBASIC30.53■■■□□ 2.48
RNF135Q8IUD6 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.52■■■□□ 2.48
RNF135Q8IUD6 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC30.52■■■□□ 2.48
RNF135Q8IUD6 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC30.51■■■□□ 2.47
RNF135Q8IUD6 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
RNF135Q8IUD6 SETD8P1-201ENST00000623146 1180 ntBASIC30.49■■■□□ 2.47
RNF135Q8IUD6 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC30.46■■■□□ 2.47
RNF135Q8IUD6 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
RNF135Q8IUD6 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
RNF135Q8IUD6 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
RNF135Q8IUD6 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
RNF135Q8IUD6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
RNF135Q8IUD6 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
RNF135Q8IUD6 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
RNF135Q8IUD6 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.37■■■□□ 2.45
RNF135Q8IUD6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
RNF135Q8IUD6 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC30.36■■■□□ 2.45
RNF135Q8IUD6 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
RNF135Q8IUD6 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
RNF135Q8IUD6 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC30.3■■■□□ 2.44
RNF135Q8IUD6 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
RNF135Q8IUD6 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.28■■■□□ 2.44
RNF135Q8IUD6 KLF16-203ENST00000592313 508 ntTSL 3 BASIC30.28■■■□□ 2.44
RNF135Q8IUD6 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.26■■■□□ 2.43
RNF135Q8IUD6 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
RNF135Q8IUD6 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.23■■■□□ 2.43
RNF135Q8IUD6 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC30.22■■■□□ 2.43
RNF135Q8IUD6 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
RNF135Q8IUD6 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC30.19■■■□□ 2.42
RNF135Q8IUD6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
RNF135Q8IUD6 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC30.18■■■□□ 2.42
RNF135Q8IUD6 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.18■■■□□ 2.42
RNF135Q8IUD6 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
RNF135Q8IUD6 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.09■■■□□ 2.41
RNF135Q8IUD6 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.06■■■□□ 2.4
RNF135Q8IUD6 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.06■■■□□ 2.4
RNF135Q8IUD6 AL162393.1-201ENST00000437852 946 ntBASIC30.03■■■□□ 2.4
RNF135Q8IUD6 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.03■■■□□ 2.4
RNF135Q8IUD6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RNF135Q8IUD6 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
RNF135Q8IUD6 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.02■■■□□ 2.4
RNF135Q8IUD6 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
RNF135Q8IUD6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
RNF135Q8IUD6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
RNF135Q8IUD6 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC29.99■■■□□ 2.39
RNF135Q8IUD6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC29.99■■■□□ 2.39
RNF135Q8IUD6 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
RNF135Q8IUD6 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC29.98■■■□□ 2.39
RNF135Q8IUD6 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
RNF135Q8IUD6 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC29.94■■■□□ 2.38
RNF135Q8IUD6 NRG1-221ENST00000614767 762 ntTSL 5 BASIC29.94■■■□□ 2.38
RNF135Q8IUD6 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
RNF135Q8IUD6 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
RNF135Q8IUD6 AP006261.1-201ENST00000584783 668 ntBASIC29.91■■■□□ 2.38
RNF135Q8IUD6 CAHM-201ENST00000604200 896 ntBASIC29.91■■■□□ 2.38
RNF135Q8IUD6 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.38
RNF135Q8IUD6 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
RNF135Q8IUD6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
RNF135Q8IUD6 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC29.83■■■□□ 2.37
RNF135Q8IUD6 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
RNF135Q8IUD6 MIR7108-201ENST00000614319 87 ntBASIC29.83■■■□□ 2.37
RNF135Q8IUD6 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
RNF135Q8IUD6 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
RNF135Q8IUD6 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
RNF135Q8IUD6 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
RNF135Q8IUD6 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC29.78■■■□□ 2.36
RNF135Q8IUD6 ABHD17AP4-201ENST00000411545 909 ntBASIC29.77■■■□□ 2.36
RNF135Q8IUD6 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.36
RNF135Q8IUD6 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC29.76■■■□□ 2.35
RNF135Q8IUD6 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms