Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC33.06■■■□□ 2.88
RNF180Q86T96 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC33.05■■■□□ 2.88
RNF180Q86T96 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC33.04■■■□□ 2.88
RNF180Q86T96 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC33.03■■■□□ 2.88
RNF180Q86T96 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC33.02■■■□□ 2.88
RNF180Q86T96 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC33■■■□□ 2.87
RNF180Q86T96 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
RNF180Q86T96 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC32.97■■■□□ 2.87
RNF180Q86T96 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC32.96■■■□□ 2.87
RNF180Q86T96 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC32.95■■■□□ 2.87
RNF180Q86T96 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC32.95■■■□□ 2.86
RNF180Q86T96 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.92■■■□□ 2.86
RNF180Q86T96 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC32.91■■■□□ 2.86
RNF180Q86T96 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC32.89■■■□□ 2.86
RNF180Q86T96 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC32.89■■■□□ 2.86
RNF180Q86T96 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC32.89■■■□□ 2.86
RNF180Q86T96 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC32.86■■■□□ 2.85
RNF180Q86T96 RARRES2P7-201ENST00000567349 469 ntBASIC32.86■■■□□ 2.85
RNF180Q86T96 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC32.84■■■□□ 2.85
RNF180Q86T96 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
RNF180Q86T96 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC32.74■■■□□ 2.83
RNF180Q86T96 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
RNF180Q86T96 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
RNF180Q86T96 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC32.68■■■□□ 2.82
RNF180Q86T96 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC32.63■■■□□ 2.81
RNF180Q86T96 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC32.63■■■□□ 2.81
RNF180Q86T96 EBPL-203ENST00000378270 579 ntTSL 2 BASIC32.62■■■□□ 2.81
RNF180Q86T96 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC32.61■■■□□ 2.81
RNF180Q86T96 AC097358.2-201ENST00000607541 1159 ntBASIC32.61■■■□□ 2.81
RNF180Q86T96 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC32.6■■■□□ 2.81
RNF180Q86T96 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC32.56■■■□□ 2.8
RNF180Q86T96 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
RNF180Q86T96 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC32.55■■■□□ 2.8
RNF180Q86T96 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC32.53■■■□□ 2.8
RNF180Q86T96 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
RNF180Q86T96 SETD8P1-201ENST00000623146 1180 ntBASIC32.51■■■□□ 2.79
RNF180Q86T96 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC32.47■■■□□ 2.79
RNF180Q86T96 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
RNF180Q86T96 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
RNF180Q86T96 AC136428.2-201ENST00000563187 214 ntBASIC32.46■■■□□ 2.79
RNF180Q86T96 KLF16-203ENST00000592313 508 ntTSL 3 BASIC32.45■■■□□ 2.79
RNF180Q86T96 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC32.42■■■□□ 2.78
RNF180Q86T96 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC32.42■■■□□ 2.78
RNF180Q86T96 ILK-212ENST00000532063 1617 ntTSL 2 BASIC32.38■■■□□ 2.77
RNF180Q86T96 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
RNF180Q86T96 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC32.34■■■□□ 2.77
RNF180Q86T96 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
RNF180Q86T96 SUZ12P1-203ENST00000578195 985 ntBASIC32.33■■■□□ 2.77
RNF180Q86T96 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
RNF180Q86T96 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC32.28■■■□□ 2.76
RNF180Q86T96 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
RNF180Q86T96 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
RNF180Q86T96 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
RNF180Q86T96 RPS2P35-201ENST00000443417 897 ntBASIC32.24■■■□□ 2.75
RNF180Q86T96 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC32.24■■■□□ 2.75
RNF180Q86T96 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC32.24■■■□□ 2.75
RNF180Q86T96 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
RNF180Q86T96 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC32.23■■■□□ 2.75
RNF180Q86T96 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC32.19■■■□□ 2.74
RNF180Q86T96 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC32.18■■■□□ 2.74
RNF180Q86T96 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC32.18■■■□□ 2.74
RNF180Q86T96 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC32.15■■■□□ 2.74
RNF180Q86T96 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
RNF180Q86T96 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC32.15■■■□□ 2.74
RNF180Q86T96 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC32.14■■■□□ 2.74
RNF180Q86T96 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
RNF180Q86T96 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
RNF180Q86T96 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC32.07■■■□□ 2.72
RNF180Q86T96 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC32.04■■■□□ 2.72
RNF180Q86T96 MVK-208ENST00000539696 608 ntTSL 5 BASIC32.03■■■□□ 2.72
RNF180Q86T96 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC32.02■■■□□ 2.72
RNF180Q86T96 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
RNF180Q86T96 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
RNF180Q86T96 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
RNF180Q86T96 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
RNF180Q86T96 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
RNF180Q86T96 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
RNF180Q86T96 AC145285.7-201ENST00000614819 1539 ntBASIC31.9■■■□□ 2.7
RNF180Q86T96 CAHM-201ENST00000604200 896 ntBASIC31.9■■■□□ 2.7
RNF180Q86T96 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
RNF180Q86T96 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC31.85■■■□□ 2.69
RNF180Q86T96 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
RNF180Q86T96 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.82■■■□□ 2.68
RNF180Q86T96 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
RNF180Q86T96 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
RNF180Q86T96 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
RNF180Q86T96 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
RNF180Q86T96 AL162393.1-201ENST00000437852 946 ntBASIC31.8■■■□□ 2.68
RNF180Q86T96 AP006261.1-201ENST00000584783 668 ntBASIC31.8■■■□□ 2.68
RNF180Q86T96 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.78■■■□□ 2.68
RNF180Q86T96 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
RNF180Q86T96 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.77■■■□□ 2.68
RNF180Q86T96 AL391121.1-201ENST00000607967 1349 ntBASIC31.76■■■□□ 2.68
RNF180Q86T96 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
RNF180Q86T96 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.74■■■□□ 2.67
RNF180Q86T96 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.73■■■□□ 2.67
RNF180Q86T96 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
RNF180Q86T96 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.72■■■□□ 2.67
RNF180Q86T96 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
RNF180Q86T96 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms