Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
FOXR1Q6PIV2 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
FOXR1Q6PIV2 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC29.84■■■□□ 2.37
FOXR1Q6PIV2 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.83■■■□□ 2.37
FOXR1Q6PIV2 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC29.79■■■□□ 2.36
FOXR1Q6PIV2 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
FOXR1Q6PIV2 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
FOXR1Q6PIV2 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC29.74■■■□□ 2.35
FOXR1Q6PIV2 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
FOXR1Q6PIV2 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
FOXR1Q6PIV2 ZNRF2P1-201ENST00000441407 443 ntBASIC29.69■■■□□ 2.34
FOXR1Q6PIV2 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC29.68■■■□□ 2.34
FOXR1Q6PIV2 AC006077.2-201ENST00000623591 457 ntBASIC29.68■■■□□ 2.34
FOXR1Q6PIV2 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29.67■■■□□ 2.34
FOXR1Q6PIV2 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
FOXR1Q6PIV2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
FOXR1Q6PIV2 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC29.62■■■□□ 2.33
FOXR1Q6PIV2 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC29.6■■■□□ 2.33
FOXR1Q6PIV2 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
FOXR1Q6PIV2 AC015813.7-201ENST00000623294 581 ntBASIC29.57■■■□□ 2.32
FOXR1Q6PIV2 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
FOXR1Q6PIV2 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
FOXR1Q6PIV2 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
FOXR1Q6PIV2 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC29.51■■■□□ 2.32
FOXR1Q6PIV2 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
FOXR1Q6PIV2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
FOXR1Q6PIV2 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
FOXR1Q6PIV2 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
FOXR1Q6PIV2 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
FOXR1Q6PIV2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
FOXR1Q6PIV2 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC29.44■■■□□ 2.3
FOXR1Q6PIV2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC29.44■■■□□ 2.3
FOXR1Q6PIV2 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
FOXR1Q6PIV2 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
FOXR1Q6PIV2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
FOXR1Q6PIV2 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
FOXR1Q6PIV2 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
FOXR1Q6PIV2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
FOXR1Q6PIV2 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
FOXR1Q6PIV2 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
FOXR1Q6PIV2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
FOXR1Q6PIV2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
FOXR1Q6PIV2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
FOXR1Q6PIV2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
FOXR1Q6PIV2 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
FOXR1Q6PIV2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
FOXR1Q6PIV2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC29.25■■■□□ 2.27
FOXR1Q6PIV2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC29.25■■■□□ 2.27
FOXR1Q6PIV2 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
FOXR1Q6PIV2 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
FOXR1Q6PIV2 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
FOXR1Q6PIV2 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
FOXR1Q6PIV2 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
FOXR1Q6PIV2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.21■■■□□ 2.27
FOXR1Q6PIV2 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC29.2■■■□□ 2.26
FOXR1Q6PIV2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
FOXR1Q6PIV2 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
FOXR1Q6PIV2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.18■■■□□ 2.26
FOXR1Q6PIV2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.26
FOXR1Q6PIV2 ILK-212ENST00000532063 1617 ntTSL 2 BASIC29.16■■■□□ 2.26
FOXR1Q6PIV2 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC29.16■■■□□ 2.26
FOXR1Q6PIV2 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC29.16■■■□□ 2.26
FOXR1Q6PIV2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
FOXR1Q6PIV2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
FOXR1Q6PIV2 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
FOXR1Q6PIV2 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
FOXR1Q6PIV2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
FOXR1Q6PIV2 AL161658.1-201ENST00000623641 1967 ntBASIC29.04■■■□□ 2.24
FOXR1Q6PIV2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
FOXR1Q6PIV2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
FOXR1Q6PIV2 AP002365.1-201ENST00000603448 772 ntBASIC28.99■■■□□ 2.23
FOXR1Q6PIV2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC28.97■■■□□ 2.23
FOXR1Q6PIV2 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC28.97■■■□□ 2.23
FOXR1Q6PIV2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
FOXR1Q6PIV2 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
FOXR1Q6PIV2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
FOXR1Q6PIV2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
FOXR1Q6PIV2 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
FOXR1Q6PIV2 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
FOXR1Q6PIV2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
FOXR1Q6PIV2 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
FOXR1Q6PIV2 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
FOXR1Q6PIV2 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
FOXR1Q6PIV2 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC28.85■■■□□ 2.21
FOXR1Q6PIV2 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
FOXR1Q6PIV2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC28.83■■■□□ 2.21
FOXR1Q6PIV2 AC139426.1-201ENST00000568218 2529 ntBASIC28.83■■■□□ 2.21
FOXR1Q6PIV2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
FOXR1Q6PIV2 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC28.82■■■□□ 2.2
FOXR1Q6PIV2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
FOXR1Q6PIV2 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
FOXR1Q6PIV2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
FOXR1Q6PIV2 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC28.79■■■□□ 2.2
FOXR1Q6PIV2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
FOXR1Q6PIV2 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
FOXR1Q6PIV2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
FOXR1Q6PIV2 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC28.76■■■□□ 2.19
FOXR1Q6PIV2 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC28.76■■■□□ 2.19
FOXR1Q6PIV2 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC28.75■■■□□ 2.19
FOXR1Q6PIV2 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 366.3 ms