Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
RNF43Q68DV7 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.1■■■□□ 2.41
RNF43Q68DV7 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
RNF43Q68DV7 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
RNF43Q68DV7 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
RNF43Q68DV7 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
RNF43Q68DV7 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
RNF43Q68DV7 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.03■■■□□ 2.4
RNF43Q68DV7 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.02■■■□□ 2.4
RNF43Q68DV7 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.01■■■□□ 2.4
RNF43Q68DV7 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
RNF43Q68DV7 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC29.93■■■□□ 2.38
RNF43Q68DV7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC29.9■■■□□ 2.38
RNF43Q68DV7 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
RNF43Q68DV7 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
RNF43Q68DV7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
RNF43Q68DV7 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC29.86■■■□□ 2.37
RNF43Q68DV7 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
RNF43Q68DV7 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC29.85■■■□□ 2.37
RNF43Q68DV7 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
RNF43Q68DV7 DYNLL1-208ENST00000550178 581 ntBASIC29.85■■■□□ 2.37
RNF43Q68DV7 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
RNF43Q68DV7 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC29.83■■■□□ 2.37
RNF43Q68DV7 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC29.83■■■□□ 2.37
RNF43Q68DV7 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
RNF43Q68DV7 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC29.75■■■□□ 2.35
RNF43Q68DV7 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
RNF43Q68DV7 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC29.74■■■□□ 2.35
RNF43Q68DV7 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
RNF43Q68DV7 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC29.72■■■□□ 2.35
RNF43Q68DV7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC29.7■■■□□ 2.35
RNF43Q68DV7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC29.69■■■□□ 2.34
RNF43Q68DV7 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.68■■■□□ 2.34
RNF43Q68DV7 AL031258.1-201ENST00000623562 325 ntBASIC29.68■■■□□ 2.34
RNF43Q68DV7 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC29.68■■■□□ 2.34
RNF43Q68DV7 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
RNF43Q68DV7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC29.65■■■□□ 2.34
RNF43Q68DV7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
RNF43Q68DV7 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC29.64■■■□□ 2.34
RNF43Q68DV7 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
RNF43Q68DV7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC29.6■■■□□ 2.33
RNF43Q68DV7 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC29.6■■■□□ 2.33
RNF43Q68DV7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC29.6■■■□□ 2.33
RNF43Q68DV7 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
RNF43Q68DV7 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC29.58■■■□□ 2.33
RNF43Q68DV7 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC29.57■■■□□ 2.32
RNF43Q68DV7 AC145285.7-201ENST00000614819 1539 ntBASIC29.55■■■□□ 2.32
RNF43Q68DV7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
RNF43Q68DV7 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC29.54■■■□□ 2.32
RNF43Q68DV7 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RNF43Q68DV7 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
RNF43Q68DV7 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
RNF43Q68DV7 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RNF43Q68DV7 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
RNF43Q68DV7 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
RNF43Q68DV7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
RNF43Q68DV7 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC29.46■■■□□ 2.31
RNF43Q68DV7 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
RNF43Q68DV7 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
RNF43Q68DV7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC29.39■■■□□ 2.3
RNF43Q68DV7 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC29.38■■■□□ 2.29
RNF43Q68DV7 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.35■■■□□ 2.29
RNF43Q68DV7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC29.35■■■□□ 2.29
RNF43Q68DV7 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC29.35■■■□□ 2.29
RNF43Q68DV7 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC29.35■■■□□ 2.29
RNF43Q68DV7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC29.33■■■□□ 2.29
RNF43Q68DV7 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
RNF43Q68DV7 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
RNF43Q68DV7 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
RNF43Q68DV7 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
RNF43Q68DV7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC29.29■■■□□ 2.28
RNF43Q68DV7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC29.29■■■□□ 2.28
RNF43Q68DV7 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC29.29■■■□□ 2.28
RNF43Q68DV7 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
RNF43Q68DV7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC29.27■■■□□ 2.28
RNF43Q68DV7 ST7-202ENST00000323984 2142 ntTSL 5 BASIC29.27■■■□□ 2.28
RNF43Q68DV7 ST7-207ENST00000393449 2127 ntTSL 5 BASIC29.27■■■□□ 2.28
RNF43Q68DV7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC29.26■■■□□ 2.27
RNF43Q68DV7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC29.25■■■□□ 2.27
RNF43Q68DV7 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
RNF43Q68DV7 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC29.24■■■□□ 2.27
RNF43Q68DV7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC29.23■■■□□ 2.27
RNF43Q68DV7 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC29.22■■■□□ 2.27
RNF43Q68DV7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC29.2■■■□□ 2.26
RNF43Q68DV7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC29.17■■■□□ 2.26
RNF43Q68DV7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC29.16■■■□□ 2.26
RNF43Q68DV7 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC29.16■■■□□ 2.26
RNF43Q68DV7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
RNF43Q68DV7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC29.14■■■□□ 2.26
RNF43Q68DV7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
RNF43Q68DV7 MVK-208ENST00000539696 608 ntTSL 5 BASIC29.12■■■□□ 2.25
RNF43Q68DV7 RARRES2P7-201ENST00000567349 469 ntBASIC29.12■■■□□ 2.25
RNF43Q68DV7 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
RNF43Q68DV7 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
RNF43Q68DV7 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
RNF43Q68DV7 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
RNF43Q68DV7 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC29.1■■■□□ 2.25
RNF43Q68DV7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.1■■■□□ 2.25
RNF43Q68DV7 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
RNF43Q68DV7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC29.09■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms