Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC37.82■■■■□ 3.65
RC3H1Q5TC82 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC37.82■■■■□ 3.64
RC3H1Q5TC82 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC37.77■■■■□ 3.64
RC3H1Q5TC82 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC37.77■■■■□ 3.64
RC3H1Q5TC82 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC37.76■■■■□ 3.64
RC3H1Q5TC82 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC37.74■■■■□ 3.63
RC3H1Q5TC82 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC37.74■■■■□ 3.63
RC3H1Q5TC82 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC37.73■■■■□ 3.63
RC3H1Q5TC82 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC37.73■■■■□ 3.63
RC3H1Q5TC82 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC37.7■■■■□ 3.63
RC3H1Q5TC82 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC37.7■■■■□ 3.63
RC3H1Q5TC82 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC37.66■■■■□ 3.62
RC3H1Q5TC82 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC37.63■■■■□ 3.61
RC3H1Q5TC82 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC37.62■■■■□ 3.61
RC3H1Q5TC82 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC37.61■■■■□ 3.61
RC3H1Q5TC82 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC37.61■■■■□ 3.61
RC3H1Q5TC82 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC37.6■■■■□ 3.61
RC3H1Q5TC82 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC37.58■■■■□ 3.61
RC3H1Q5TC82 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC37.57■■■■□ 3.6
RC3H1Q5TC82 RARRES2P7-201ENST00000567349 469 ntBASIC37.51■■■■□ 3.6
RC3H1Q5TC82 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC37.46■■■■□ 3.59
RC3H1Q5TC82 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
RC3H1Q5TC82 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC37.41■■■■□ 3.58
RC3H1Q5TC82 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC37.36■■■■□ 3.57
RC3H1Q5TC82 EBPL-203ENST00000378270 579 ntTSL 2 BASIC37.36■■■■□ 3.57
RC3H1Q5TC82 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC37.29■■■■□ 3.56
RC3H1Q5TC82 AC097358.2-201ENST00000607541 1159 ntBASIC37.27■■■■□ 3.56
RC3H1Q5TC82 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC37.26■■■■□ 3.56
RC3H1Q5TC82 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC37.26■■■■□ 3.56
RC3H1Q5TC82 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC37.26■■■■□ 3.56
RC3H1Q5TC82 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC37.24■■■■□ 3.55
RC3H1Q5TC82 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC37.23■■■■□ 3.55
RC3H1Q5TC82 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
RC3H1Q5TC82 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC37.21■■■■□ 3.55
RC3H1Q5TC82 AC136428.2-201ENST00000563187 214 ntBASIC37.21■■■■□ 3.55
RC3H1Q5TC82 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC37.21■■■■□ 3.55
RC3H1Q5TC82 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC37.19■■■■□ 3.54
RC3H1Q5TC82 SETD8P1-201ENST00000623146 1180 ntBASIC37.15■■■■□ 3.54
RC3H1Q5TC82 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC37.14■■■■□ 3.54
RC3H1Q5TC82 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC37.11■■■■□ 3.53
RC3H1Q5TC82 KLF16-203ENST00000592313 508 ntTSL 3 BASIC37.09■■■■□ 3.53
RC3H1Q5TC82 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC37.08■■■■□ 3.53
RC3H1Q5TC82 SUZ12P1-203ENST00000578195 985 ntBASIC37.07■■■■□ 3.52
RC3H1Q5TC82 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC37.07■■■■□ 3.52
RC3H1Q5TC82 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC37.04■■■■□ 3.52
RC3H1Q5TC82 ILK-212ENST00000532063 1617 ntTSL 2 BASIC37.03■■■■□ 3.52
RC3H1Q5TC82 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC37■■■■□ 3.51
RC3H1Q5TC82 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC36.98■■■■□ 3.51
RC3H1Q5TC82 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
RC3H1Q5TC82 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC36.97■■■■□ 3.51
RC3H1Q5TC82 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.51
RC3H1Q5TC82 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC36.95■■■■□ 3.51
RC3H1Q5TC82 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
RC3H1Q5TC82 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC36.94■■■■□ 3.5
RC3H1Q5TC82 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC36.93■■■■□ 3.5
RC3H1Q5TC82 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC36.9■■■■□ 3.5
RC3H1Q5TC82 RPS2P35-201ENST00000443417 897 ntBASIC36.86■■■■□ 3.49
RC3H1Q5TC82 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC36.82■■■■□ 3.49
RC3H1Q5TC82 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC36.82■■■■□ 3.48
RC3H1Q5TC82 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC36.82■■■■□ 3.48
RC3H1Q5TC82 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC36.81■■■■□ 3.48
RC3H1Q5TC82 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC36.79■■■■□ 3.48
RC3H1Q5TC82 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC36.79■■■■□ 3.48
RC3H1Q5TC82 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
RC3H1Q5TC82 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC36.76■■■■□ 3.48
RC3H1Q5TC82 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC36.74■■■■□ 3.47
RC3H1Q5TC82 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC36.67■■■■□ 3.46
RC3H1Q5TC82 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC36.64■■■■□ 3.46
RC3H1Q5TC82 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
RC3H1Q5TC82 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC36.63■■■■□ 3.45
RC3H1Q5TC82 MVK-208ENST00000539696 608 ntTSL 5 BASIC36.6■■■■□ 3.45
RC3H1Q5TC82 CAHM-201ENST00000604200 896 ntBASIC36.6■■■■□ 3.45
RC3H1Q5TC82 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC36.58■■■■□ 3.45
RC3H1Q5TC82 AC145285.7-201ENST00000614819 1539 ntBASIC36.57■■■■□ 3.44
RC3H1Q5TC82 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC36.56■■■■□ 3.44
RC3H1Q5TC82 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC36.55■■■■□ 3.44
RC3H1Q5TC82 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC36.55■■■■□ 3.44
RC3H1Q5TC82 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC36.51■■■■□ 3.44
RC3H1Q5TC82 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC36.5■■■■□ 3.43
RC3H1Q5TC82 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC36.5■■■■□ 3.43
RC3H1Q5TC82 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
RC3H1Q5TC82 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC36.42■■■■□ 3.42
RC3H1Q5TC82 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC36.41■■■■□ 3.42
RC3H1Q5TC82 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC36.41■■■■□ 3.42
RC3H1Q5TC82 AL162393.1-201ENST00000437852 946 ntBASIC36.39■■■■□ 3.42
RC3H1Q5TC82 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC36.39■■■■□ 3.42
RC3H1Q5TC82 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
RC3H1Q5TC82 AL391121.1-201ENST00000607967 1349 ntBASIC36.38■■■■□ 3.41
RC3H1Q5TC82 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
RC3H1Q5TC82 NRG1-221ENST00000614767 762 ntTSL 5 BASIC36.38■■■■□ 3.41
RC3H1Q5TC82 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC36.38■■■■□ 3.41
RC3H1Q5TC82 AP006261.1-201ENST00000584783 668 ntBASIC36.36■■■■□ 3.41
RC3H1Q5TC82 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC36.33■■■■□ 3.41
RC3H1Q5TC82 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC36.33■■■■□ 3.41
RC3H1Q5TC82 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC36.33■■■■□ 3.41
RC3H1Q5TC82 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
RC3H1Q5TC82 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
RC3H1Q5TC82 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
RC3H1Q5TC82 AL133380.1-201ENST00000506013 324 ntBASIC36.29■■■■□ 3.4
RC3H1Q5TC82 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC36.28■■■■□ 3.4
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms