Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CKS1BP61024 ILK-212ENST00000532063 1617 ntTSL 2 BASIC19.91■□□□□ 0.78
CKS1BP61024 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
CKS1BP61024 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC19.87■□□□□ 0.77
CKS1BP61024 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CKS1BP61024 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CKS1BP61024 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CKS1BP61024 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC19.8■□□□□ 0.76
CKS1BP61024 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CKS1BP61024 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CKS1BP61024 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CKS1BP61024 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CKS1BP61024 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CKS1BP61024 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CKS1BP61024 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CKS1BP61024 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC19.72■□□□□ 0.75
CKS1BP61024 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CKS1BP61024 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CKS1BP61024 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CKS1BP61024 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CKS1BP61024 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CKS1BP61024 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CKS1BP61024 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC19.63■□□□□ 0.73
CKS1BP61024 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CKS1BP61024 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CKS1BP61024 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CKS1BP61024 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CKS1BP61024 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CKS1BP61024 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CKS1BP61024 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CKS1BP61024 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CKS1BP61024 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CKS1BP61024 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC19.57■□□□□ 0.72
CKS1BP61024 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CKS1BP61024 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CKS1BP61024 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CKS1BP61024 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.53■□□□□ 0.72
CKS1BP61024 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC19.53■□□□□ 0.72
CKS1BP61024 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CKS1BP61024 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CKS1BP61024 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CKS1BP61024 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CKS1BP61024 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC19.48■□□□□ 0.71
CKS1BP61024 AC135731.1-201ENST00000569415 2548 ntBASIC19.45■□□□□ 0.7
CKS1BP61024 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CKS1BP61024 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CKS1BP61024 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CKS1BP61024 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CKS1BP61024 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CKS1BP61024 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CKS1BP61024 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC19.39■□□□□ 0.69
CKS1BP61024 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CKS1BP61024 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CKS1BP61024 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CKS1BP61024 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CKS1BP61024 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CKS1BP61024 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CKS1BP61024 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC19.31■□□□□ 0.68
CKS1BP61024 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
CKS1BP61024 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CKS1BP61024 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CKS1BP61024 AC145285.7-201ENST00000614819 1539 ntBASIC19.3■□□□□ 0.68
CKS1BP61024 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CKS1BP61024 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CKS1BP61024 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CKS1BP61024 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CKS1BP61024 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CKS1BP61024 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CKS1BP61024 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CKS1BP61024 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CKS1BP61024 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
CKS1BP61024 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.25■□□□□ 0.67
CKS1BP61024 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.25■□□□□ 0.67
CKS1BP61024 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CKS1BP61024 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CKS1BP61024 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CKS1BP61024 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CKS1BP61024 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CKS1BP61024 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CKS1BP61024 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CKS1BP61024 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
CKS1BP61024 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CKS1BP61024 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CKS1BP61024 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CKS1BP61024 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CKS1BP61024 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CKS1BP61024 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CKS1BP61024 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CKS1BP61024 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CKS1BP61024 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CKS1BP61024 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CKS1BP61024 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CKS1BP61024 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CKS1BP61024 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CKS1BP61024 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CKS1BP61024 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CKS1BP61024 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CKS1BP61024 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC19.1■□□□□ 0.65
CKS1BP61024 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CKS1BP61024 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms