Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC26.51■■□□□ 1.83
PER3P56645 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.5■■□□□ 1.83
PER3P56645 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PER3P56645 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
PER3P56645 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PER3P56645 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PER3P56645 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PER3P56645 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
PER3P56645 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PER3P56645 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC26.43■■□□□ 1.82
PER3P56645 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.41■■□□□ 1.82
PER3P56645 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PER3P56645 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PER3P56645 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.36■■□□□ 1.81
PER3P56645 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.33■■□□□ 1.81
PER3P56645 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.29■■□□□ 1.8
PER3P56645 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.29■■□□□ 1.8
PER3P56645 AL031258.1-201ENST00000623562 325 ntBASIC26.29■■□□□ 1.8
PER3P56645 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PER3P56645 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PER3P56645 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PER3P56645 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.27■■□□□ 1.8
PER3P56645 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.25■■□□□ 1.79
PER3P56645 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PER3P56645 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
PER3P56645 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PER3P56645 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC26.21■■□□□ 1.79
PER3P56645 RARRES2P7-201ENST00000567349 469 ntBASIC26.21■■□□□ 1.79
PER3P56645 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
PER3P56645 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PER3P56645 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC26.16■■□□□ 1.78
PER3P56645 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PER3P56645 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.14■■□□□ 1.78
PER3P56645 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.13■■□□□ 1.77
PER3P56645 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PER3P56645 ILK-212ENST00000532063 1617 ntTSL 2 BASIC26.11■■□□□ 1.77
PER3P56645 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.11■■□□□ 1.77
PER3P56645 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
PER3P56645 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC26.09■■□□□ 1.77
PER3P56645 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.08■■□□□ 1.77
PER3P56645 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
PER3P56645 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PER3P56645 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PER3P56645 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PER3P56645 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.01■■□□□ 1.75
PER3P56645 AC097358.2-201ENST00000607541 1159 ntBASIC25.98■■□□□ 1.75
PER3P56645 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC25.98■■□□□ 1.75
PER3P56645 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PER3P56645 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.97■■□□□ 1.75
PER3P56645 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PER3P56645 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
PER3P56645 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PER3P56645 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
PER3P56645 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC25.9■■□□□ 1.74
PER3P56645 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
PER3P56645 EBPL-203ENST00000378270 579 ntTSL 2 BASIC25.88■■□□□ 1.73
PER3P56645 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PER3P56645 SETD8P1-201ENST00000623146 1180 ntBASIC25.87■■□□□ 1.73
PER3P56645 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
PER3P56645 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PER3P56645 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PER3P56645 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
PER3P56645 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
PER3P56645 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PER3P56645 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.79■■□□□ 1.72
PER3P56645 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PER3P56645 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PER3P56645 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC25.76■■□□□ 1.71
PER3P56645 AC136428.2-201ENST00000563187 214 ntBASIC25.76■■□□□ 1.71
PER3P56645 RPS2P35-201ENST00000443417 897 ntBASIC25.75■■□□□ 1.71
PER3P56645 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
PER3P56645 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PER3P56645 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC25.72■■□□□ 1.71
PER3P56645 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PER3P56645 SUZ12P1-203ENST00000578195 985 ntBASIC25.7■■□□□ 1.7
PER3P56645 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
PER3P56645 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PER3P56645 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
PER3P56645 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PER3P56645 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
PER3P56645 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.67■■□□□ 1.7
PER3P56645 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25.65■■□□□ 1.7
PER3P56645 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC25.65■■□□□ 1.7
PER3P56645 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.63■■□□□ 1.69
PER3P56645 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PER3P56645 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PER3P56645 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC25.61■■□□□ 1.69
PER3P56645 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.6■■□□□ 1.69
PER3P56645 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.6■■□□□ 1.69
PER3P56645 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25.6■■□□□ 1.69
PER3P56645 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PER3P56645 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PER3P56645 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.58■■□□□ 1.69
PER3P56645 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.68
PER3P56645 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PER3P56645 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.57■■□□□ 1.68
PER3P56645 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PER3P56645 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.55■■□□□ 1.68
PER3P56645 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
PER3P56645 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms