Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CSPG5O95196 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC31.55■■■□□ 2.64
CSPG5O95196 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
CSPG5O95196 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CSPG5O95196 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.49■■■□□ 2.63
CSPG5O95196 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CSPG5O95196 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.47■■■□□ 2.63
CSPG5O95196 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC31.46■■■□□ 2.63
CSPG5O95196 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CSPG5O95196 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.45■■■□□ 2.63
CSPG5O95196 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC31.45■■■□□ 2.63
CSPG5O95196 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CSPG5O95196 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.44■■■□□ 2.62
CSPG5O95196 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC31.4■■■□□ 2.62
CSPG5O95196 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.37■■■□□ 2.61
CSPG5O95196 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.35■■■□□ 2.61
CSPG5O95196 RARRES2P7-201ENST00000567349 469 ntBASIC31.34■■■□□ 2.61
CSPG5O95196 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.33■■■□□ 2.61
CSPG5O95196 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CSPG5O95196 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.27■■■□□ 2.6
CSPG5O95196 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.24■■■□□ 2.59
CSPG5O95196 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CSPG5O95196 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
CSPG5O95196 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.21■■■□□ 2.59
CSPG5O95196 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CSPG5O95196 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CSPG5O95196 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
CSPG5O95196 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.1■■■□□ 2.57
CSPG5O95196 AC097358.2-201ENST00000607541 1159 ntBASIC31.09■■■□□ 2.57
CSPG5O95196 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CSPG5O95196 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC31.07■■■□□ 2.56
CSPG5O95196 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CSPG5O95196 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CSPG5O95196 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31■■■□□ 2.55
CSPG5O95196 SETD8P1-201ENST00000623146 1180 ntBASIC31■■■□□ 2.55
CSPG5O95196 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC30.98■■■□□ 2.55
CSPG5O95196 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CSPG5O95196 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
CSPG5O95196 AC136428.2-201ENST00000563187 214 ntBASIC30.95■■■□□ 2.55
CSPG5O95196 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
CSPG5O95196 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
CSPG5O95196 RPS2P35-201ENST00000443417 897 ntBASIC30.88■■■□□ 2.53
CSPG5O95196 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CSPG5O95196 KLF16-203ENST00000592313 508 ntTSL 3 BASIC30.85■■■□□ 2.53
CSPG5O95196 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC30.83■■■□□ 2.53
CSPG5O95196 SUZ12P1-203ENST00000578195 985 ntBASIC30.82■■■□□ 2.52
CSPG5O95196 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CSPG5O95196 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CSPG5O95196 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC30.81■■■□□ 2.52
CSPG5O95196 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC30.81■■■□□ 2.52
CSPG5O95196 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.8■■■□□ 2.52
CSPG5O95196 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
CSPG5O95196 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.79■■■□□ 2.52
CSPG5O95196 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CSPG5O95196 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
CSPG5O95196 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CSPG5O95196 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC30.76■■■□□ 2.51
CSPG5O95196 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CSPG5O95196 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
CSPG5O95196 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC30.74■■■□□ 2.51
CSPG5O95196 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC30.73■■■□□ 2.51
CSPG5O95196 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CSPG5O95196 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.64■■■□□ 2.5
CSPG5O95196 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.63■■■□□ 2.49
CSPG5O95196 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CSPG5O95196 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CSPG5O95196 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.62■■■□□ 2.49
CSPG5O95196 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CSPG5O95196 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.58■■■□□ 2.49
CSPG5O95196 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.57■■■□□ 2.48
CSPG5O95196 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
CSPG5O95196 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CSPG5O95196 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CSPG5O95196 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CSPG5O95196 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.49■■■□□ 2.47
CSPG5O95196 AC145285.7-201ENST00000614819 1539 ntBASIC30.48■■■□□ 2.47
CSPG5O95196 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CSPG5O95196 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.46■■■□□ 2.47
CSPG5O95196 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.42■■■□□ 2.46
CSPG5O95196 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.4■■■□□ 2.46
CSPG5O95196 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.4■■■□□ 2.46
CSPG5O95196 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CSPG5O95196 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
CSPG5O95196 CAHM-201ENST00000604200 896 ntBASIC30.38■■■□□ 2.45
CSPG5O95196 AL162393.1-201ENST00000437852 946 ntBASIC30.35■■■□□ 2.45
CSPG5O95196 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.35■■■□□ 2.45
CSPG5O95196 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CSPG5O95196 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CSPG5O95196 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CSPG5O95196 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
CSPG5O95196 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CSPG5O95196 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.28■■■□□ 2.44
CSPG5O95196 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CSPG5O95196 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.25■■■□□ 2.43
CSPG5O95196 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CSPG5O95196 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.23■■■□□ 2.43
CSPG5O95196 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CSPG5O95196 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CSPG5O95196 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
CSPG5O95196 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms