Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC39.58■■■■□ 3.93
LTN1O94822 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC39.56■■■■□ 3.92
LTN1O94822 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC39.56■■■■□ 3.92
LTN1O94822 AL031258.1-201ENST00000623562 325 ntBASIC39.54■■■■□ 3.92
LTN1O94822 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC39.53■■■■□ 3.92
LTN1O94822 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC39.43■■■■□ 3.9
LTN1O94822 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC39.41■■■■□ 3.9
LTN1O94822 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC39.41■■■■□ 3.9
LTN1O94822 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC39.41■■■■□ 3.9
LTN1O94822 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC39.38■■■■□ 3.9
LTN1O94822 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC39.37■■■■□ 3.89
LTN1O94822 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC39.37■■■■□ 3.89
LTN1O94822 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC39.32■■■■□ 3.89
LTN1O94822 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.88
LTN1O94822 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC39.31■■■■□ 3.88
LTN1O94822 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC39.25■■■■□ 3.87
LTN1O94822 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC39.24■■■■□ 3.87
LTN1O94822 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC39.2■■■■□ 3.87
LTN1O94822 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC39.16■■■■□ 3.86
LTN1O94822 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC39.15■■■■□ 3.86
LTN1O94822 RARRES2P7-201ENST00000567349 469 ntBASIC39.15■■■■□ 3.86
LTN1O94822 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC39.13■■■■□ 3.86
LTN1O94822 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC39.13■■■■□ 3.86
LTN1O94822 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC39.13■■■■□ 3.86
LTN1O94822 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC39.13■■■■□ 3.85
LTN1O94822 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
LTN1O94822 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC39.07■■■■□ 3.85
LTN1O94822 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC39.04■■■■□ 3.84
LTN1O94822 ILK-212ENST00000532063 1617 ntTSL 2 BASIC39.03■■■■□ 3.84
LTN1O94822 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC39.02■■■■□ 3.84
LTN1O94822 EBPL-203ENST00000378270 579 ntTSL 2 BASIC39■■■■□ 3.83
LTN1O94822 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC39■■■■□ 3.83
LTN1O94822 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC38.95■■■■□ 3.83
LTN1O94822 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
LTN1O94822 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC38.93■■■■□ 3.82
LTN1O94822 AC136428.2-201ENST00000563187 214 ntBASIC38.93■■■■□ 3.82
LTN1O94822 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC38.85■■■■□ 3.81
LTN1O94822 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC38.85■■■■□ 3.81
LTN1O94822 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC38.83■■■■□ 3.81
LTN1O94822 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC38.8■■■■□ 3.8
LTN1O94822 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC38.8■■■■□ 3.8
LTN1O94822 SETD8P1-201ENST00000623146 1180 ntBASIC38.76■■■■□ 3.8
LTN1O94822 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC38.75■■■■□ 3.79
LTN1O94822 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC38.74■■■■□ 3.79
LTN1O94822 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC38.73■■■■□ 3.79
LTN1O94822 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC38.72■■■■□ 3.79
LTN1O94822 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
LTN1O94822 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC38.7■■■■□ 3.79
LTN1O94822 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC38.68■■■■□ 3.78
LTN1O94822 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
LTN1O94822 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
LTN1O94822 AC097358.2-201ENST00000607541 1159 ntBASIC38.65■■■■□ 3.78
LTN1O94822 SUZ12P1-203ENST00000578195 985 ntBASIC38.65■■■■□ 3.78
LTN1O94822 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC38.63■■■■□ 3.77
LTN1O94822 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.77
LTN1O94822 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC38.61■■■■□ 3.77
LTN1O94822 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC38.6■■■■□ 3.77
LTN1O94822 KLF16-203ENST00000592313 508 ntTSL 3 BASIC38.59■■■■□ 3.77
LTN1O94822 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
LTN1O94822 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC38.57■■■■□ 3.77
LTN1O94822 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC38.57■■■■□ 3.76
LTN1O94822 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC38.57■■■■□ 3.76
LTN1O94822 AC145285.7-201ENST00000614819 1539 ntBASIC38.54■■■■□ 3.76
LTN1O94822 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC38.54■■■■□ 3.76
LTN1O94822 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC38.52■■■■□ 3.76
LTN1O94822 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC38.48■■■■□ 3.75
LTN1O94822 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC38.42■■■■□ 3.74
LTN1O94822 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC38.41■■■■□ 3.74
LTN1O94822 MVK-208ENST00000539696 608 ntTSL 5 BASIC38.39■■■■□ 3.74
LTN1O94822 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC38.36■■■■□ 3.73
LTN1O94822 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC38.33■■■■□ 3.73
LTN1O94822 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC38.32■■■■□ 3.73
LTN1O94822 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC38.31■■■■□ 3.72
LTN1O94822 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC38.3■■■■□ 3.72
LTN1O94822 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC38.3■■■■□ 3.72
LTN1O94822 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC38.3■■■■□ 3.72
LTN1O94822 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC38.29■■■■□ 3.72
LTN1O94822 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC38.26■■■■□ 3.72
LTN1O94822 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC38.26■■■■□ 3.72
LTN1O94822 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC38.18■■■■□ 3.7
LTN1O94822 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC38.17■■■■□ 3.7
LTN1O94822 RPS2P35-201ENST00000443417 897 ntBASIC38.17■■■■□ 3.7
LTN1O94822 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC38.11■■■■□ 3.69
LTN1O94822 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC38.09■■■■□ 3.69
LTN1O94822 AL133380.1-201ENST00000506013 324 ntBASIC38.07■■■■□ 3.68
LTN1O94822 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC38.07■■■■□ 3.68
LTN1O94822 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC38.06■■■■□ 3.68
LTN1O94822 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
LTN1O94822 AL162393.1-201ENST00000437852 946 ntBASIC38.06■■■■□ 3.68
LTN1O94822 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC38.06■■■■□ 3.68
LTN1O94822 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC38.05■■■■□ 3.68
LTN1O94822 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC38.05■■■■□ 3.68
LTN1O94822 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC38.04■■■■□ 3.68
LTN1O94822 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
LTN1O94822 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC37.99■■■■□ 3.67
LTN1O94822 CAHM-201ENST00000604200 896 ntBASIC37.99■■■■□ 3.67
LTN1O94822 AL391121.1-201ENST00000607967 1349 ntBASIC37.99■■■■□ 3.67
LTN1O94822 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC37.98■■■■□ 3.67
LTN1O94822 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC37.97■■■■□ 3.67
LTN1O94822 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC37.96■■■■□ 3.67
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms