Protein–RNA interactions for Protein: O75679

RFPL3, Ret finger protein-like 3, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3O75679 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
RFPL3O75679 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC28.5■■■□□ 2.15
RFPL3O75679 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC28.5■■■□□ 2.15
RFPL3O75679 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.5■■■□□ 2.15
RFPL3O75679 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC28.49■■■□□ 2.15
RFPL3O75679 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC28.48■■■□□ 2.15
RFPL3O75679 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
RFPL3O75679 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
RFPL3O75679 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC28.43■■■□□ 2.14
RFPL3O75679 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
RFPL3O75679 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC28.39■■■□□ 2.14
RFPL3O75679 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC28.39■■■□□ 2.14
RFPL3O75679 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC28.38■■■□□ 2.13
RFPL3O75679 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RFPL3O75679 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RFPL3O75679 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
RFPL3O75679 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC28.35■■■□□ 2.13
RFPL3O75679 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC28.35■■■□□ 2.13
RFPL3O75679 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC28.33■■■□□ 2.13
RFPL3O75679 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC28.32■■■□□ 2.12
RFPL3O75679 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC28.32■■■□□ 2.12
RFPL3O75679 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC28.31■■■□□ 2.12
RFPL3O75679 RARRES2P7-201ENST00000567349 469 ntBASIC28.31■■■□□ 2.12
RFPL3O75679 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
RFPL3O75679 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
RFPL3O75679 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
RFPL3O75679 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC28.22■■■□□ 2.11
RFPL3O75679 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC28.17■■■□□ 2.1
RFPL3O75679 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
RFPL3O75679 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
RFPL3O75679 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC28.09■■■□□ 2.09
RFPL3O75679 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC28.08■■■□□ 2.09
RFPL3O75679 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC28.08■■■□□ 2.09
RFPL3O75679 EBPL-203ENST00000378270 579 ntTSL 2 BASIC28.07■■■□□ 2.08
RFPL3O75679 AC097358.2-201ENST00000607541 1159 ntBASIC28.07■■■□□ 2.08
RFPL3O75679 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
RFPL3O75679 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
RFPL3O75679 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
RFPL3O75679 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC28.01■■■□□ 2.07
RFPL3O75679 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC28■■■□□ 2.07
RFPL3O75679 SETD8P1-201ENST00000623146 1180 ntBASIC28■■■□□ 2.07
RFPL3O75679 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
RFPL3O75679 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
RFPL3O75679 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
RFPL3O75679 AC136428.2-201ENST00000563187 214 ntBASIC27.95■■■□□ 2.06
RFPL3O75679 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
RFPL3O75679 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
RFPL3O75679 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC27.93■■■□□ 2.06
RFPL3O75679 KLF16-203ENST00000592313 508 ntTSL 3 BASIC27.93■■■□□ 2.06
RFPL3O75679 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC27.92■■■□□ 2.06
RFPL3O75679 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC27.89■■■□□ 2.06
RFPL3O75679 SUZ12P1-203ENST00000578195 985 ntBASIC27.85■■■□□ 2.05
RFPL3O75679 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC27.83■■■□□ 2.05
RFPL3O75679 ILK-212ENST00000532063 1617 ntTSL 2 BASIC27.82■■■□□ 2.04
RFPL3O75679 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
RFPL3O75679 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
RFPL3O75679 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
RFPL3O75679 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
RFPL3O75679 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC27.79■■■□□ 2.04
RFPL3O75679 RPS2P35-201ENST00000443417 897 ntBASIC27.78■■■□□ 2.04
RFPL3O75679 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
RFPL3O75679 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
RFPL3O75679 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
RFPL3O75679 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC27.76■■■□□ 2.03
RFPL3O75679 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC27.75■■■□□ 2.03
RFPL3O75679 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC27.74■■■□□ 2.03
RFPL3O75679 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC27.73■■■□□ 2.03
RFPL3O75679 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC27.72■■■□□ 2.03
RFPL3O75679 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.71■■■□□ 2.03
RFPL3O75679 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC27.71■■■□□ 2.03
RFPL3O75679 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
RFPL3O75679 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC27.69■■■□□ 2.02
RFPL3O75679 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC27.69■■■□□ 2.02
RFPL3O75679 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC27.67■■■□□ 2.02
RFPL3O75679 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
RFPL3O75679 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC27.63■■■□□ 2.01
RFPL3O75679 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
RFPL3O75679 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC27.6■■■□□ 2.01
RFPL3O75679 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
RFPL3O75679 MVK-208ENST00000539696 608 ntTSL 5 BASIC27.56■■■□□ 2
RFPL3O75679 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC27.55■■■□□ 2
RFPL3O75679 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC27.52■■■□□ 2
RFPL3O75679 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
RFPL3O75679 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
RFPL3O75679 CAHM-201ENST00000604200 896 ntBASIC27.46■■□□□ 1.99
RFPL3O75679 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
RFPL3O75679 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
RFPL3O75679 AC145285.7-201ENST00000614819 1539 ntBASIC27.43■■□□□ 1.98
RFPL3O75679 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
RFPL3O75679 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
RFPL3O75679 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
RFPL3O75679 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC27.4■■□□□ 1.98
RFPL3O75679 AL162393.1-201ENST00000437852 946 ntBASIC27.4■■□□□ 1.98
RFPL3O75679 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
RFPL3O75679 AP006261.1-201ENST00000584783 668 ntBASIC27.39■■□□□ 1.98
RFPL3O75679 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
RFPL3O75679 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
RFPL3O75679 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC27.38■■□□□ 1.97
RFPL3O75679 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RFPL3O75679 AL391121.1-201ENST00000607967 1349 ntBASIC27.35■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms