Protein–RNA interactions for Protein: O75679

RFPL3, Ret finger protein-like 3, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3O75679 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
RFPL3O75679 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC28.5■■■□□ 2.15
RFPL3O75679 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC28.5■■■□□ 2.15
RFPL3O75679 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.5■■■□□ 2.15
RFPL3O75679 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC28.49■■■□□ 2.15
RFPL3O75679 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC28.48■■■□□ 2.15
RFPL3O75679 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
RFPL3O75679 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
RFPL3O75679 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC28.43■■■□□ 2.14
RFPL3O75679 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
RFPL3O75679 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC28.39■■■□□ 2.14
RFPL3O75679 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC28.39■■■□□ 2.14
RFPL3O75679 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC28.38■■■□□ 2.13
RFPL3O75679 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RFPL3O75679 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RFPL3O75679 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
RFPL3O75679 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC28.35■■■□□ 2.13
RFPL3O75679 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC28.35■■■□□ 2.13
RFPL3O75679 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC28.33■■■□□ 2.13
RFPL3O75679 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC28.32■■■□□ 2.12
RFPL3O75679 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC28.32■■■□□ 2.12
RFPL3O75679 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC28.31■■■□□ 2.12
RFPL3O75679 RARRES2P7-201ENST00000567349 469 ntBASIC28.31■■■□□ 2.12
RFPL3O75679 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
RFPL3O75679 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
RFPL3O75679 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
RFPL3O75679 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC28.22■■■□□ 2.11
RFPL3O75679 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC28.17■■■□□ 2.1
RFPL3O75679 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
RFPL3O75679 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
RFPL3O75679 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC28.09■■■□□ 2.09
RFPL3O75679 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC28.08■■■□□ 2.09
RFPL3O75679 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC28.08■■■□□ 2.09
RFPL3O75679 EBPL-203ENST00000378270 579 ntTSL 2 BASIC28.07■■■□□ 2.08
RFPL3O75679 AC097358.2-201ENST00000607541 1159 ntBASIC28.07■■■□□ 2.08
RFPL3O75679 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
RFPL3O75679 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
RFPL3O75679 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
RFPL3O75679 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC28.01■■■□□ 2.07
RFPL3O75679 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC28■■■□□ 2.07
RFPL3O75679 SETD8P1-201ENST00000623146 1180 ntBASIC28■■■□□ 2.07
RFPL3O75679 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
RFPL3O75679 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
RFPL3O75679 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
RFPL3O75679 AC136428.2-201ENST00000563187 214 ntBASIC27.95■■■□□ 2.06
RFPL3O75679 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
RFPL3O75679 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
RFPL3O75679 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC27.93■■■□□ 2.06
RFPL3O75679 KLF16-203ENST00000592313 508 ntTSL 3 BASIC27.93■■■□□ 2.06
RFPL3O75679 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC27.92■■■□□ 2.06
RFPL3O75679 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC27.89■■■□□ 2.06
RFPL3O75679 SUZ12P1-203ENST00000578195 985 ntBASIC27.85■■■□□ 2.05
RFPL3O75679 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC27.83■■■□□ 2.05
RFPL3O75679 ILK-212ENST00000532063 1617 ntTSL 2 BASIC27.82■■■□□ 2.04
RFPL3O75679 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
RFPL3O75679 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
RFPL3O75679 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
RFPL3O75679 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
RFPL3O75679 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC27.79■■■□□ 2.04
RFPL3O75679 RPS2P35-201ENST00000443417 897 ntBASIC27.78■■■□□ 2.04
RFPL3O75679 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
RFPL3O75679 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
RFPL3O75679 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
RFPL3O75679 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC27.76■■■□□ 2.03
RFPL3O75679 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC27.75■■■□□ 2.03
RFPL3O75679 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC27.74■■■□□ 2.03
RFPL3O75679 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC27.73■■■□□ 2.03
RFPL3O75679 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC27.72■■■□□ 2.03
RFPL3O75679 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC27.71■■■□□ 2.03
RFPL3O75679 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC27.71■■■□□ 2.03
RFPL3O75679 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
RFPL3O75679 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC27.69■■■□□ 2.02
RFPL3O75679 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC27.69■■■□□ 2.02
RFPL3O75679 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC27.67■■■□□ 2.02
RFPL3O75679 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
RFPL3O75679 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC27.63■■■□□ 2.01
RFPL3O75679 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
RFPL3O75679 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC27.6■■■□□ 2.01
RFPL3O75679 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
RFPL3O75679 MVK-208ENST00000539696 608 ntTSL 5 BASIC27.56■■■□□ 2
RFPL3O75679 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC27.55■■■□□ 2
RFPL3O75679 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC27.52■■■□□ 2
RFPL3O75679 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
RFPL3O75679 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
RFPL3O75679 CAHM-201ENST00000604200 896 ntBASIC27.46■■□□□ 1.99
RFPL3O75679 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
RFPL3O75679 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
RFPL3O75679 AC145285.7-201ENST00000614819 1539 ntBASIC27.43■■□□□ 1.98
RFPL3O75679 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
RFPL3O75679 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
RFPL3O75679 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
RFPL3O75679 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC27.4■■□□□ 1.98
RFPL3O75679 AL162393.1-201ENST00000437852 946 ntBASIC27.4■■□□□ 1.98
RFPL3O75679 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
RFPL3O75679 AP006261.1-201ENST00000584783 668 ntBASIC27.39■■□□□ 1.98
RFPL3O75679 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
RFPL3O75679 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
RFPL3O75679 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC27.38■■□□□ 1.97
RFPL3O75679 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
RFPL3O75679 AL391121.1-201ENST00000607967 1349 ntBASIC27.35■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms