Protein–RNA interactions for Protein: O60292

SIPA1L3, Signal-induced proliferation-associated 1-like protein 3, humanhuman

Predicted RBP Predictions only

Length 1,781 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3O60292 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC38.02■■■■□ 3.68
SIPA1L3O60292 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC38.01■■■■□ 3.68
SIPA1L3O60292 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC38■■■■□ 3.67
SIPA1L3O60292 ILK-212ENST00000532063 1617 ntTSL 2 BASIC37.98■■■■□ 3.67
SIPA1L3O60292 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC37.93■■■■□ 3.66
SIPA1L3O60292 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC37.92■■■■□ 3.66
SIPA1L3O60292 AL031258.1-201ENST00000623562 325 ntBASIC37.88■■■■□ 3.65
SIPA1L3O60292 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC37.83■■■■□ 3.65
SIPA1L3O60292 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC37.83■■■■□ 3.65
SIPA1L3O60292 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC37.79■■■■□ 3.64
SIPA1L3O60292 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC37.79■■■■□ 3.64
SIPA1L3O60292 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC37.78■■■■□ 3.64
SIPA1L3O60292 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC37.77■■■■□ 3.64
SIPA1L3O60292 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC37.76■■■■□ 3.64
SIPA1L3O60292 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC37.76■■■■□ 3.63
SIPA1L3O60292 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC37.74■■■■□ 3.63
SIPA1L3O60292 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC37.68■■■■□ 3.62
SIPA1L3O60292 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC37.64■■■■□ 3.62
SIPA1L3O60292 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC37.6■■■■□ 3.61
SIPA1L3O60292 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC37.6■■■■□ 3.61
SIPA1L3O60292 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC37.59■■■■□ 3.61
SIPA1L3O60292 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC37.56■■■■□ 3.6
SIPA1L3O60292 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC37.56■■■■□ 3.6
SIPA1L3O60292 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC37.55■■■■□ 3.6
SIPA1L3O60292 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
SIPA1L3O60292 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC37.54■■■■□ 3.6
SIPA1L3O60292 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC37.54■■■■□ 3.6
SIPA1L3O60292 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC37.54■■■■□ 3.6
SIPA1L3O60292 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC37.53■■■■□ 3.6
SIPA1L3O60292 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC37.52■■■■□ 3.6
SIPA1L3O60292 EBPL-203ENST00000378270 579 ntTSL 2 BASIC37.46■■■■□ 3.59
SIPA1L3O60292 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC37.45■■■■□ 3.59
SIPA1L3O60292 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC37.41■■■■□ 3.58
SIPA1L3O60292 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC37.39■■■■□ 3.58
SIPA1L3O60292 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC37.31■■■■□ 3.56
SIPA1L3O60292 AC145285.7-201ENST00000614819 1539 ntBASIC37.3■■■■□ 3.56
SIPA1L3O60292 RARRES2P7-201ENST00000567349 469 ntBASIC37.27■■■■□ 3.56
SIPA1L3O60292 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC37.25■■■■□ 3.55
SIPA1L3O60292 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC37.22■■■■□ 3.55
SIPA1L3O60292 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC37.22■■■■□ 3.55
SIPA1L3O60292 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC37.19■■■■□ 3.54
SIPA1L3O60292 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC37.19■■■■□ 3.54
SIPA1L3O60292 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC37.19■■■■□ 3.54
SIPA1L3O60292 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC37.18■■■■□ 3.54
SIPA1L3O60292 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC37.18■■■■□ 3.54
SIPA1L3O60292 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC37.17■■■■□ 3.54
SIPA1L3O60292 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC37.16■■■■□ 3.54
SIPA1L3O60292 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
SIPA1L3O60292 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC37.16■■■■□ 3.54
SIPA1L3O60292 AC136428.2-201ENST00000563187 214 ntBASIC37.14■■■■□ 3.54
SIPA1L3O60292 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC37.14■■■■□ 3.54
SIPA1L3O60292 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC37.13■■■■□ 3.54
SIPA1L3O60292 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC37.13■■■■□ 3.53
SIPA1L3O60292 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
SIPA1L3O60292 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC37.08■■■■□ 3.53
SIPA1L3O60292 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC37.05■■■■□ 3.52
SIPA1L3O60292 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC37.03■■■■□ 3.52
SIPA1L3O60292 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC37.01■■■■□ 3.52
SIPA1L3O60292 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC36.99■■■■□ 3.51
SIPA1L3O60292 MVK-208ENST00000539696 608 ntTSL 5 BASIC36.97■■■■□ 3.51
SIPA1L3O60292 SETD8P1-201ENST00000623146 1180 ntBASIC36.97■■■■□ 3.51
SIPA1L3O60292 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
SIPA1L3O60292 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC36.95■■■■□ 3.51
SIPA1L3O60292 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC36.95■■■■□ 3.51
SIPA1L3O60292 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC36.94■■■■□ 3.5
SIPA1L3O60292 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC36.93■■■■□ 3.5
SIPA1L3O60292 KLF16-203ENST00000592313 508 ntTSL 3 BASIC36.91■■■■□ 3.5
SIPA1L3O60292 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC36.91■■■■□ 3.5
SIPA1L3O60292 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC36.91■■■■□ 3.5
SIPA1L3O60292 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC36.89■■■■□ 3.5
SIPA1L3O60292 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
SIPA1L3O60292 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC36.84■■■■□ 3.49
SIPA1L3O60292 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC36.84■■■■□ 3.49
SIPA1L3O60292 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
SIPA1L3O60292 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
SIPA1L3O60292 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC36.82■■■■□ 3.48
SIPA1L3O60292 SUZ12P1-203ENST00000578195 985 ntBASIC36.82■■■■□ 3.48
SIPA1L3O60292 AC097358.2-201ENST00000607541 1159 ntBASIC36.8■■■■□ 3.48
SIPA1L3O60292 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
SIPA1L3O60292 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC36.77■■■■□ 3.48
SIPA1L3O60292 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
SIPA1L3O60292 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC36.74■■■■□ 3.47
SIPA1L3O60292 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC36.73■■■■□ 3.47
SIPA1L3O60292 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
SIPA1L3O60292 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC36.68■■■■□ 3.46
SIPA1L3O60292 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC36.67■■■■□ 3.46
SIPA1L3O60292 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC36.67■■■■□ 3.46
SIPA1L3O60292 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC36.64■■■■□ 3.46
SIPA1L3O60292 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC36.64■■■■□ 3.46
SIPA1L3O60292 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC36.63■■■■□ 3.46
SIPA1L3O60292 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC36.63■■■■□ 3.45
SIPA1L3O60292 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC36.61■■■■□ 3.45
SIPA1L3O60292 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
SIPA1L3O60292 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC36.61■■■■□ 3.45
SIPA1L3O60292 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC36.61■■■■□ 3.45
SIPA1L3O60292 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC36.59■■■■□ 3.45
SIPA1L3O60292 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC36.58■■■■□ 3.45
SIPA1L3O60292 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC36.56■■■■□ 3.44
SIPA1L3O60292 AL133380.1-201ENST00000506013 324 ntBASIC36.56■■■■□ 3.44
SIPA1L3O60292 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC36.56■■■■□ 3.44
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms