Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 HHAT-204ENST00000413764 3575 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.964e-8■■■■■ 27.1
EIF3DO15371 PKD1-240ENST00000570253 603 ntTSL 522.46■■□□□ 1.192e-6■■■■■ 27
EIF3DO15371 PKD1-232ENST00000566905 559 ntTSL 320.71■□□□□ 0.912e-6■■■■■ 27
EIF3DO15371 PKD1-239ENST00000570193 596 ntTSL 516.74■□□□□ 0.272e-6■■■■■ 27
EIF3DO15371 PKD1-231ENST00000566784 493 ntTSL 515.01□□□□□ -0.012e-6■■■■■ 27
EIF3DO15371 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.11■■□□□ 1.616e-7■■■■□ 26.7
EIF3DO15371 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.096e-7■■■■□ 26.7
EIF3DO15371 RILPL1-201ENST00000340724 2389 ntTSL 515.6■□□□□ 0.096e-7■■■■□ 26.7
EIF3DO15371 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.681e-7■■■■□ 26.7
EIF3DO15371 C7orf50-204ENST00000412051 1147 ntAPPRIS ALT2 TSL 222.56■■□□□ 1.21e-7■■■■□ 26.7
EIF3DO15371 MAP2K2-208ENST00000599345 923 ntTSL 522.49■■□□□ 1.191e-7■■■■□ 26.7
EIF3DO15371 NXN-202ENST00000537628 1340 ntTSL 3 BASIC22.19■■□□□ 1.141e-7■■■■□ 26.7
EIF3DO15371 CPLX2-207ENST00000514150 970 ntTSL 422.02■■□□□ 1.121e-7■■■■□ 26.7
EIF3DO15371 CPLX2-203ENST00000502265 532 ntTSL 421.97■■□□□ 1.111e-7■■■■□ 26.7
EIF3DO15371 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.52■■□□□ 1.041e-7■■■■□ 26.7
EIF3DO15371 NXN-206ENST00000571684 1159 ntTSL 318.9■□□□□ 0.621e-7■■■■□ 26.7
EIF3DO15371 C7orf50-206ENST00000465681 2621 ntTSL 1 (best)17.81■□□□□ 0.441e-7■■■■□ 26.7
EIF3DO15371 CPLX2-205ENST00000509837 557 ntTSL 417.65■□□□□ 0.421e-7■■■■□ 26.7
EIF3DO15371 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.09■□□□□ 0.331e-7■■■■□ 26.7
EIF3DO15371 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.79■□□□□ 0.281e-7■■■■□ 26.7
EIF3DO15371 C7orf50-205ENST00000444428 507 ntAPPRIS ALT2 TSL 316.75■□□□□ 0.271e-7■■■■□ 26.7
EIF3DO15371 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.241e-7■■■■□ 26.7
EIF3DO15371 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.111e-7■■■■□ 26.7
EIF3DO15371 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.061e-7■■■■□ 26.7
EIF3DO15371 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.121e-7■■■■□ 26.7
EIF3DO15371 CPLX2-208ENST00000515025 567 ntTSL 411.29□□□□□ -0.61e-7■■■■□ 26.7
EIF3DO15371 CPLX2-210ENST00000515502 469 ntTSL 48.85□□□□□ -0.991e-7■■■■□ 26.7
EIF3DO15371 TNKS-201ENST00000310430 9620 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.622e-7■■■■□ 26.6
EIF3DO15371 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.04□□□□□ -1.282e-7■■■■□ 26.6
EIF3DO15371 TNKS-203ENST00000517770 574 ntTSL 45.89□□□□□ -1.472e-7■■■■□ 26.6
EIF3DO15371 ASMTL-AS1-205ENST00000602357 435 ntTSL 2 BASIC12.22□□□□□ -0.454e-8■■■■□ 26.4
EIF3DO15371 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.144e-7■■■■□ 26.3
EIF3DO15371 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.074e-7■■■■□ 26.3
EIF3DO15371 SYCP2L-202ENST00000341041 3069 ntTSL 213.17□□□□□ -0.34e-7■■■■□ 26.3
EIF3DO15371 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.68■□□□□ 0.741e-7■■■■□ 26
EIF3DO15371 PVT1-204ENST00000517525 392 ntTSL 326.74■■□□□ 1.873e-7■■■■□ 25.7
EIF3DO15371 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC26.56■■□□□ 1.843e-7■■■■□ 25.7
EIF3DO15371 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.813e-7■■■■□ 25.7
EIF3DO15371 HSPA4L-203ENST00000508549 1822 ntTSL 1 (best)17.81■□□□□ 0.443e-7■■■■□ 25.7
EIF3DO15371 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.343e-7■■■■□ 25.7
EIF3DO15371 TIMM8A-202ENST00000480575 1182 ntTSL 214.57□□□□□ -0.083e-7■■■■□ 25.7
EIF3DO15371 PVT1-203ENST00000513868 1699 ntTSL 1 (best) BASIC14.19□□□□□ -0.143e-7■■■■□ 25.7
EIF3DO15371 PVT1-208ENST00000519481 542 ntTSL 211.65□□□□□ -0.543e-7■■■■□ 25.7
EIF3DO15371 PVT1-209ENST00000520913 584 ntTSL 211.59□□□□□ -0.553e-7■■■■□ 25.7
EIF3DO15371 HSPA4L-201ENST00000296464 10790 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.723e-7■■■■□ 25.7
EIF3DO15371 PVT1-206ENST00000517838 518 ntTSL 27.93□□□□□ -1.143e-7■■■■□ 25.7
EIF3DO15371 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.7■■□□□ 1.712e-7■■■■□ 25.6
EIF3DO15371 BDH1-205ENST00000432819 955 ntTSL 521.05■□□□□ 0.962e-7■■■■□ 25.6
EIF3DO15371 BDH1-209ENST00000446746 868 ntTSL 321.05■□□□□ 0.962e-7■■■■□ 25.6
EIF3DO15371 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.112e-7■■■■□ 25.6
EIF3DO15371 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.122e-7■■■■□ 25.6
EIF3DO15371 BDH1-214ENST00000479425 1144 ntTSL 214□□□□□ -0.172e-7■■■■□ 25.6
EIF3DO15371 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.382e-7■■■■□ 25.6
EIF3DO15371 BDH1-206ENST00000434143 659 ntTSL 312.62□□□□□ -0.392e-7■■■■□ 25.6
EIF3DO15371 BDH1-213ENST00000477015 595 ntTSL 210.96□□□□□ -0.652e-7■■■■□ 25.6
EIF3DO15371 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.234e-14■■■■□ 25.5
EIF3DO15371 TSPEAR-AS2-203ENST00000465978 345 ntTSL 513.24□□□□□ -0.291e-7■■■■□ 25.5
EIF3DO15371 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.63■□□□□ 0.575e-6■■■■□ 25.2
EIF3DO15371 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.32■□□□□ 0.045e-6■■■■□ 25.2
EIF3DO15371 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.055e-6■■■■□ 25.2
EIF3DO15371 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.352e-6■■■■□ 25.1
EIF3DO15371 PGC-204ENST00000425343 1152 ntTSL 2 BASIC13.9□□□□□ -0.182e-6■■■■□ 25.1
EIF3DO15371 PGC-201ENST00000356667 480 ntTSL 511.2□□□□□ -0.622e-6■■■■□ 25.1
EIF3DO15371 PGC-203ENST00000415707 399 ntTSL 57.18□□□□□ -1.262e-6■■■■□ 25.1
EIF3DO15371 KMT2B-204ENST00000592092 823 ntTSL 219.45■□□□□ 0.75e-7■■■■□ 24.8
EIF3DO15371 HERC2-209ENST00000567869 3523 ntTSL 28.98□□□□□ -0.975e-7■■■■□ 24.8
EIF3DO15371 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.435e-7■■■■□ 24.8
EIF3DO15371 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.475e-7■■■■□ 24.8
EIF3DO15371 RNU6-32P-201ENST00000383948 107 ntBASIC0.08□□□□□ -2.45e-7■■■■□ 24.8
EIF3DO15371 ASMTL-AS1-201ENST00000419737 553 ntTSL 214.8□□□□□ -0.044e-8■■■■□ 24.6
EIF3DO15371 SDC1-204ENST00000429035 646 ntTSL 315.51■□□□□ 0.078e-8■■■■□ 24.5
EIF3DO15371 SDC1-206ENST00000482879 558 ntTSL 413.46□□□□□ -0.258e-8■■■■□ 24.5
EIF3DO15371 NOLC1-204ENST00000464969 2288 ntTSL 212.6□□□□□ -0.396e-13■■■■□ 24.3
EIF3DO15371 NOLC1-207ENST00000488254 2441 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.636e-13■■■■□ 24.3
EIF3DO15371 NOLC1-205ENST00000476468 844 ntTSL 59.67□□□□□ -0.866e-13■■■■□ 24.3
EIF3DO15371 NOLC1-202ENST00000405356 3967 ntTSL 1 (best) BASIC9.3□□□□□ -0.926e-13■■■■□ 24.3
EIF3DO15371 NOLC1-209ENST00000605788 3932 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.936e-13■■■■□ 24.3
EIF3DO15371 NOLC1-208ENST00000603946 3217 ntTSL 1 (best)8.82□□□□□ -16e-13■■■■□ 24.3
EIF3DO15371 NOLC1-203ENST00000461421 777 ntTSL 38.33□□□□□ -1.086e-13■■■■□ 24.3
EIF3DO15371 NOLC1-201ENST00000370007 3727 ntTSL 1 (best)6.75□□□□□ -1.336e-13■■■■□ 24.3
EIF3DO15371 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.81■■□□□ 1.083e-7■■■■□ 24.2
EIF3DO15371 ASMTL-AS1-202ENST00000420411 697 ntTSL 1 (best)12.16□□□□□ -0.463e-7■■■■□ 24.2
EIF3DO15371 BRD2-209ENST00000469132 1628 ntTSL 219.23■□□□□ 0.673e-10■■■■□ 23.9
EIF3DO15371 TRIO-216ENST00000510757 509 ntTSL 27.11□□□□□ -1.274e-7■■■■□ 23.9
EIF3DO15371 RNU6-9-201ENST00000384776 107 ntBASIC2.66□□□□□ -1.982e-41■■■■□ 23.8
EIF3DO15371 ZEB1-214ENST00000558863 1355 ntTSL 526.77■■□□□ 1.889e-7■■■■□ 23.8
EIF3DO15371 GPAT4-206ENST00000520258 870 ntTSL 224.51■■□□□ 1.519e-7■■■■□ 23.8
EIF3DO15371 GPAT4-205ENST00000520223 1101 ntTSL 222.01■■□□□ 1.119e-7■■■■□ 23.8
EIF3DO15371 WDR90-208ENST00000547543 1060 ntTSL 520.69■□□□□ 0.99e-7■■■■□ 23.8
EIF3DO15371 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.879e-7■■■■□ 23.8
EIF3DO15371 WDR90-214ENST00000549024 2257 ntTSL 220.17■□□□□ 0.829e-7■■■■□ 23.8
EIF3DO15371 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.2■□□□□ 0.669e-7■■■■□ 23.8
EIF3DO15371 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.579e-7■■■■□ 23.8
EIF3DO15371 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.57■□□□□ 0.569e-7■■■■□ 23.8
EIF3DO15371 WDR90-225ENST00000553080 1941 ntTSL 217.19■□□□□ 0.349e-7■■■■□ 23.8
EIF3DO15371 WDR90-223ENST00000552728 3133 ntTSL 516.25■□□□□ 0.199e-7■■■■□ 23.8
EIF3DO15371 ZEB1-218ENST00000560196 1014 ntTSL 1 (best)16.02■□□□□ 0.169e-7■■■■□ 23.8
EIF3DO15371 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.029e-7■■■■□ 23.8
EIF3DO15371 GPAT4-203ENST00000519853 768 ntTSL 514.99□□□□□ -0.019e-7■■■■□ 23.8
EIF3DO15371 WDR90-207ENST00000547407 3847 ntTSL 214.15□□□□□ -0.149e-7■■■■□ 23.8
Retrieved 100 of 4,069 protein–RNA pairs in 33.1 ms