RNA–Protein interactions for RNA: ENST00000553080.1

WDR90-225, Transcript of WD repeat domain 90, humanhuman

TSL 2

Gene WDR90, Length 1,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR90-225ENST00000553080 NISCHQ9Y2I1 1504 aa35.19■■■■□ 3.22
WDR90-225ENST00000553080 CCDC180Q9P1Z9 1646 aa30.85■■■□□ 2.53
WDR90-225ENST00000553080 ZCCHC6Q5VYS8 1495 aaKnown RBP29.53■■■□□ 2.32
WDR90-225ENST00000553080 ABCC9O60706 1549 aa29.3■■■□□ 2.28
WDR90-225ENST00000553080 DCAF1Q9Y4B6 1507 aa29.11■■■□□ 2.25
WDR90-225ENST00000553080 DCAF8L2P0C7V8 631 aa29.03■■■□□ 2.24
WDR90-225ENST00000553080 MYO15BQ96JP2 1530 aa28.85■■■□□ 2.21
WDR90-225ENST00000553080 NACADO15069 1562 aa28.74■■■□□ 2.19
WDR90-225ENST00000553080 RB1CC1Q8TDY2 1594 aa28.55■■■□□ 2.16
WDR90-225ENST00000553080 SHROOM4Q9ULL8 1493 aa28.49■■■□□ 2.15
WDR90-225ENST00000553080 SCRIBQ14160 1630 aa28.3■■■□□ 2.12
WDR90-225ENST00000553080 UNC13AQ9UPW8 1703 aa28.05■■■□□ 2.08
WDR90-225ENST00000553080 BICRAQ9NZM4 1560 aa27.72■■■□□ 2.03
WDR90-225ENST00000553080 PABPN1Q86U42 306 aaKnown RBP eCLIP27.53■■■□□ 22e-8■■■■■ 33.9
WDR90-225ENST00000553080 CECR2Q9BXF3 1484 aa27.34■■□□□ 1.97
WDR90-225ENST00000553080 SUPT5HO00267 1087 aaKnown RBP27.28■■□□□ 1.96
WDR90-225ENST00000553080 BAZ1AQ9NRL2 1556 aaPredicted RBP27.2■■□□□ 1.94
WDR90-225ENST00000553080 RSF1Q96T23 1441 aaPredicted RBP27.19■■□□□ 1.94
WDR90-225ENST00000553080 MROH2BQ7Z745 1585 aa27.18■■□□□ 1.94
WDR90-225ENST00000553080 SMARCA4P51532 1647 aa27.13■■□□□ 1.93
WDR90-225ENST00000553080 WIZO95785 1651 aa26.97■■□□□ 1.91
WDR90-225ENST00000553080 EIF4G1Q04637 1599 aaKnown RBP26.89■■□□□ 1.9
WDR90-225ENST00000553080 PEG3Q9GZU2 1588 aa26.8■■□□□ 1.88
WDR90-225ENST00000553080 ATAD2BQ9ULI0 1458 aa26.7■■□□□ 1.86
WDR90-225ENST00000553080 SMARCA2P51531 1590 aa26.7■■□□□ 1.86
WDR90-225ENST00000553080 TOP2AP11388 1531 aaKnown RBP26.67■■□□□ 1.86
WDR90-225ENST00000553080 CHIC1Q5VXU3 224 aa26.61■■□□□ 1.85
WDR90-225ENST00000553080 DNAJC5BQ9UF47 199 aa26.58■■□□□ 1.85
WDR90-225ENST00000553080 CC2D2AQ9P2K1 1620 aa26.55■■□□□ 1.84
WDR90-225ENST00000553080 BAZ1BQ9UIG0 1483 aaKnown RBP26.54■■□□□ 1.84
WDR90-225ENST00000553080 NCAPD3P42695 1498 aa26.5■■□□□ 1.83
WDR90-225ENST00000553080 HMGXB3Q12766 1538 aa26.49■■□□□ 1.83
WDR90-225ENST00000553080 CCDC88BA6NC98 1476 aa26.36■■□□□ 1.81
WDR90-225ENST00000553080 HRCP23327 699 aa26.14■■□□□ 1.78
WDR90-225ENST00000553080 PCGF6Q9BYE7 350 aa25.87■■□□□ 1.73
WDR90-225ENST00000553080 CFTRP13569 1480 aa25.86■■□□□ 1.73
WDR90-225ENST00000553080 PRDM2Q13029 1718 aa25.81■■□□□ 1.72
WDR90-225ENST00000553080 CADPSQ9ULU8 1353 aa25.79■■□□□ 1.72
WDR90-225ENST00000553080 ABCC8Q09428 1581 aa25.77■■□□□ 1.72
WDR90-225ENST00000553080 LOC105371045A0A1W2PR82 267 aa25.71■■□□□ 1.71
WDR90-225ENST00000553080 LAMC3Q9Y6N6 1575 aa25.67■■□□□ 1.7
WDR90-225ENST00000553080 NESP48681 1621 aa25.67■■□□□ 1.7
WDR90-225ENST00000553080 TRIM41Q8WV44 630 aa25.66■■□□□ 1.7
WDR90-225ENST00000553080 WRNQ14191 1432 aaPredicted RBP eCLIP25.6■■□□□ 1.69
WDR90-225ENST00000553080 SYNJ1O43426 1573 aa25.55■■□□□ 1.68
WDR90-225ENST00000553080 FANCD2Q9BXW9 1451 aa25.53■■□□□ 1.68
WDR90-225ENST00000553080 TOP2BQ02880 1626 aa25.46■■□□□ 1.67
WDR90-225ENST00000553080 BIVM-ERCC5R4GMW8 1640 aa25.46■■□□□ 1.67
WDR90-225ENST00000553080 TRIM26Q12899 539 aaPredicted RBP25.45■■□□□ 1.66
WDR90-225ENST00000553080 PPARGC1BQ86YN6 1023 aaKnown RBP25.44■■□□□ 1.66
WDR90-225ENST00000553080 CUX1P39880 1505 aa25.43■■□□□ 1.66
WDR90-225ENST00000553080 PDS5BQ9NTI5 1447 aa25.43■■□□□ 1.66
WDR90-225ENST00000553080 KIF21AQ7Z4S6 1674 aa25.42■■□□□ 1.66
WDR90-225ENST00000553080 CEP164Q9UPV0 1460 aa25.4■■□□□ 1.66
WDR90-225ENST00000553080 DNMBPQ6XZF7 1577 aa25.29■■□□□ 1.64
WDR90-225ENST00000553080 URB2Q14146 1524 aaKnown RBP25.23■■□□□ 1.63
WDR90-225ENST00000553080 TOPBP1Q92547 1522 aa25.23■■□□□ 1.63
WDR90-225ENST00000553080 SOGA1O94964 1423 aa25.2■■□□□ 1.62
WDR90-225ENST00000553080 FGD5Q6ZNL6 1462 aa25.18■■□□□ 1.62
WDR90-225ENST00000553080 FAM9AQ8IZU1 332 aaPredicted RBP25.18■■□□□ 1.62
WDR90-225ENST00000553080 ERCC6Q03468 1493 aa25.17■■□□□ 1.62
WDR90-225ENST00000553080 MRC2Q9UBG0 1479 aa25.14■■□□□ 1.62
WDR90-225ENST00000553080 RUSC2Q8N2Y8 1516 aa25.13■■□□□ 1.61
WDR90-225ENST00000553080 EEA1Q15075 1411 aa25.1■■□□□ 1.61
WDR90-225ENST00000553080 POLA1P09884 1462 aaPredicted RBP25.1■■□□□ 1.61
WDR90-225ENST00000553080 THOC2Q8NI27 1593 aaKnown RBP25.05■■□□□ 1.6
WDR90-225ENST00000553080 WDR62O43379 1518 aa25.05■■□□□ 1.6
WDR90-225ENST00000553080 ZEB1P37275 1124 aaPredicted RBP25.02■■□□□ 1.6
WDR90-225ENST00000553080 RAD54L2Q9Y4B4 1467 aa25■■□□□ 1.59
WDR90-225ENST00000553080 WDR97A6NE52 1622 aa24.97■■□□□ 1.59
WDR90-225ENST00000553080 KIF27Q86VH2 1401 aa24.96■■□□□ 1.59
WDR90-225ENST00000553080 ABCA10Q8WWZ4 1543 aa24.96■■□□□ 1.59
WDR90-225ENST00000553080 CUX2O14529 1486 aa24.96■■□□□ 1.59
WDR90-225ENST00000553080 CSRNP3Q8WYN3 585 aa24.95■■□□□ 1.58
WDR90-225ENST00000553080 TARBP1Q13395 1621 aaKnown RBP24.91■■□□□ 1.58
WDR90-225ENST00000553080 KIF21BO75037 1637 aa24.84■■□□□ 1.57
WDR90-225ENST00000553080 EHMT2Q96KQ7 1210 aa24.82■■□□□ 1.56
WDR90-225ENST00000553080 ABCA5Q8WWZ7 1642 aa24.81■■□□□ 1.56
WDR90-225ENST00000553080 IFT140Q96RY7 1462 aa24.8■■□□□ 1.56
WDR90-225ENST00000553080 GOLGA3Q08378 1498 aa24.76■■□□□ 1.55
WDR90-225ENST00000553080 PRXQ9BXM0 1461 aa24.76■■□□□ 1.55
WDR90-225ENST00000553080 IGF1RP08069 1367 aa24.75■■□□□ 1.55
WDR90-225ENST00000553080 TDRD9Q8NDG6 1382 aaKnown RBP24.75■■□□□ 1.55
WDR90-225ENST00000553080 GAPVD1Q14C86 1478 aa24.72■■□□□ 1.55
WDR90-225ENST00000553080 RAPGEF2Q9Y4G8 1499 aa24.72■■□□□ 1.55
WDR90-225ENST00000553080 ERICH3Q5RHP9 1530 aa24.71■■□□□ 1.55
WDR90-225ENST00000553080 ZNF608Q9ULD9 1512 aaPredicted RBP24.68■■□□□ 1.54
WDR90-225ENST00000553080 PBRM1Q86U86 1689 aa24.67■■□□□ 1.54
WDR90-225ENST00000553080 CUL7Q14999 1698 aa24.65■■□□□ 1.54
WDR90-225ENST00000553080 AQRO60306 1485 aaKnown RBP eCLIP24.64■■□□□ 1.54
WDR90-225ENST00000553080 EIF4G3O43432 1585 aaKnown RBP24.63■■□□□ 1.53
WDR90-225ENST00000553080 CARMIL1Q5VZK9 1371 aa24.62■■□□□ 1.53
WDR90-225ENST00000553080 TNIKQ9UKE5 1360 aa24.62■■□□□ 1.53
WDR90-225ENST00000553080 UBTFP17480 764 aaKnown RBP24.6■■□□□ 1.53
WDR90-225ENST00000553080 GRIN2BQ13224 1484 aa24.56■■□□□ 1.52
WDR90-225ENST00000553080 ADAMTS12P58397 1594 aa24.5■■□□□ 1.51
WDR90-225ENST00000553080 CEP162Q5TB80 1403 aa24.49■■□□□ 1.51
WDR90-225ENST00000553080 FHAD1B1AJZ9 1412 aa24.44■■□□□ 1.5
WDR90-225ENST00000553080 SNAPC4Q5SXM2 1469 aa24.44■■□□□ 1.5
WDR90-225ENST00000553080 MAGI1Q96QZ7 1491 aaPredicted RBP24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms