RNA–Protein interactions for RNA: ENST00000552728.5

WDR90-223, Transcript of WD repeat domain 90, humanhuman

TSL 5

Gene WDR90, Length 3,133 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR90-223ENST00000552728 NISCHQ9Y2I1 1504 aa29.99■■■□□ 2.39
WDR90-223ENST00000552728 SHROOM4Q9ULL8 1493 aa26.61■■□□□ 1.85
WDR90-223ENST00000552728 SUPT5HO00267 1087 aaKnown RBP26.26■■□□□ 1.79
WDR90-223ENST00000552728 DCAF8L2P0C7V8 631 aa25.68■■□□□ 1.7
WDR90-223ENST00000552728 CHIC1Q5VXU3 224 aa25.39■■□□□ 1.65
WDR90-223ENST00000552728 MYO15BQ96JP2 1530 aa25.38■■□□□ 1.65
WDR90-223ENST00000552728 ZCCHC6Q5VYS8 1495 aaKnown RBP25.38■■□□□ 1.65
WDR90-223ENST00000552728 PCGF6Q9BYE7 350 aa25.23■■□□□ 1.63
WDR90-223ENST00000552728 HRCP23327 699 aa25.19■■□□□ 1.62
WDR90-223ENST00000552728 PPARGC1BQ86YN6 1023 aaKnown RBP25.02■■□□□ 1.6
WDR90-223ENST00000552728 CCDC180Q9P1Z9 1646 aa24.96■■□□□ 1.59
WDR90-223ENST00000552728 LOC105371045A0A1W2PR82 267 aa24.94■■□□□ 1.58
WDR90-223ENST00000552728 EHMT2Q96KQ7 1210 aa24.46■■□□□ 1.51
WDR90-223ENST00000552728 DCAF1Q9Y4B6 1507 aa24.41■■□□□ 1.5
WDR90-223ENST00000552728 FAM9AQ8IZU1 332 aaPredicted RBP24.39■■□□□ 1.49
WDR90-223ENST00000552728 TRIM26Q12899 539 aaPredicted RBP24.33■■□□□ 1.49
WDR90-223ENST00000552728 TRIM41Q8WV44 630 aa24.19■■□□□ 1.46
WDR90-223ENST00000552728 ABCC9O60706 1549 aa24.08■■□□□ 1.44
WDR90-223ENST00000552728 SCRIBQ14160 1630 aa24.04■■□□□ 1.44
WDR90-223ENST00000552728 RSF1Q96T23 1441 aaPredicted RBP24.03■■□□□ 1.44
WDR90-223ENST00000552728 RB1CC1Q8TDY2 1594 aa23.86■■□□□ 1.41
WDR90-223ENST00000552728 ZEB1P37275 1124 aaPredicted RBP23.79■■□□□ 1.4
WDR90-223ENST00000552728 TTBK1Q5TCY1 1321 aaPredicted RBP23.7■■□□□ 1.38
WDR90-223ENST00000552728 CECR2Q9BXF3 1484 aa23.67■■□□□ 1.38
WDR90-223ENST00000552728 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.63■■□□□ 1.37
WDR90-223ENST00000552728 SCAF1Q9H7N4 1312 aaKnown RBP23.59■■□□□ 1.37
WDR90-223ENST00000552728 MROH2BQ7Z745 1585 aa23.51■■□□□ 1.35
WDR90-223ENST00000552728 CCER1Q8TC90 406 aaPredicted RBP23.49■■□□□ 1.35
WDR90-223ENST00000552728 WIZO95785 1651 aa23.39■■□□□ 1.33
WDR90-223ENST00000552728 NEUROD1Q13562 356 aa23.22■■□□□ 1.31
WDR90-223ENST00000552728 NACADO15069 1562 aa23.15■■□□□ 1.3
WDR90-223ENST00000552728 ABCC8Q09428 1581 aa23.15■■□□□ 1.3
WDR90-223ENST00000552728 DIEXFQ68CQ4 756 aaKnown RBP23.15■■□□□ 1.3
WDR90-223ENST00000552728 ACIN1Q9UKV3 1341 aaKnown RBP23.12■■□□□ 1.29
WDR90-223ENST00000552728 UBTFP17480 764 aaKnown RBP23.11■■□□□ 1.29
WDR90-223ENST00000552728 PELP1Q8IZL8 1130 aaKnown RBP23.11■■□□□ 1.29
WDR90-223ENST00000552728 CCDC88BA6NC98 1476 aa23.11■■□□□ 1.29
WDR90-223ENST00000552728 PABPN1Q86U42 306 aaKnown RBP eCLIP23.08■■□□□ 1.282e-8■■■■■ 33.9
WDR90-223ENST00000552728 SOGA1O94964 1423 aa23.05■■□□□ 1.28
WDR90-223ENST00000552728 GTF3C3Q9Y5Q9 886 aa23.04■■□□□ 1.28
WDR90-223ENST00000552728 BAZ1AQ9NRL2 1556 aaPredicted RBP23.02■■□□□ 1.28
WDR90-223ENST00000552728 CEP162Q5TB80 1403 aa23.01■■□□□ 1.27
WDR90-223ENST00000552728 YTHDC1Q96MU7 727 aaKnown RBP22.96■■□□□ 1.27
WDR90-223ENST00000552728 RUSC2Q8N2Y8 1516 aa22.94■■□□□ 1.26
WDR90-223ENST00000552728 RANGAP1P46060 587 aaPredicted RBP22.94■■□□□ 1.26
WDR90-223ENST00000552728 EIF4G1Q04637 1599 aaKnown RBP22.93■■□□□ 1.26
WDR90-223ENST00000552728 HNRNPUL2Q1KMD3 747 aaKnown RBP22.92■■□□□ 1.26
WDR90-223ENST00000552728 CSRNP3Q8WYN3 585 aa22.92■■□□□ 1.26
WDR90-223ENST00000552728 CENPBP07199 599 aaPredicted RBP22.9■■□□□ 1.26
WDR90-223ENST00000552728 TOP2AP11388 1531 aaKnown RBP22.81■■□□□ 1.24
WDR90-223ENST00000552728 TNIKQ9UKE5 1360 aa22.81■■□□□ 1.24
WDR90-223ENST00000552728 WRNQ14191 1432 aaPredicted RBP eCLIP22.8■■□□□ 1.24
WDR90-223ENST00000552728 ZNF316A6NFI3 1004 aaPredicted RBP22.78■■□□□ 1.24
WDR90-223ENST00000552728 SMARCA2P51531 1590 aa22.78■■□□□ 1.24
WDR90-223ENST00000552728 SMARCA4P51532 1647 aa22.74■■□□□ 1.23
WDR90-223ENST00000552728 MIER1Q8N108 512 aa22.67■■□□□ 1.22
WDR90-223ENST00000552728 GOLGA3Q08378 1498 aa22.61■■□□□ 1.21
WDR90-223ENST00000552728 APLP2Q06481 763 aa22.57■■□□□ 1.2
WDR90-223ENST00000552728 EEA1Q15075 1411 aa22.55■■□□□ 1.2
WDR90-223ENST00000552728 UNC13AQ9UPW8 1703 aa22.54■■□□□ 1.2
WDR90-223ENST00000552728 CLIP1P30622 1438 aa22.52■■□□□ 1.2
WDR90-223ENST00000552728 SYNJ1O43426 1573 aa22.41■■□□□ 1.18
WDR90-223ENST00000552728 CEP164Q9UPV0 1460 aa22.41■■□□□ 1.18
WDR90-223ENST00000552728 RAPGEF2Q9Y4G8 1499 aa22.39■■□□□ 1.18
WDR90-223ENST00000552728 BICRAQ9NZM4 1560 aa22.36■■□□□ 1.17
WDR90-223ENST00000552728 VPS8Q8N3P4 1428 aa22.34■■□□□ 1.17
WDR90-223ENST00000552728 ITGAEP38570 1179 aa22.29■■□□□ 1.16
WDR90-223ENST00000552728 KANK4Q5T7N3 995 aaPredicted RBP22.26■■□□□ 1.15
WDR90-223ENST00000552728 KIF21BO75037 1637 aa22.21■■□□□ 1.15
WDR90-223ENST00000552728 BAZ1BQ9UIG0 1483 aaKnown RBP22.19■■□□□ 1.14
WDR90-223ENST00000552728 ATAD2BQ9ULI0 1458 aa22.17■■□□□ 1.14
WDR90-223ENST00000552728 DHX57Q6P158 1386 aaKnown RBP22.13■■□□□ 1.13
WDR90-223ENST00000552728 PEG3Q9GZU2 1588 aa22.03■■□□□ 1.12
WDR90-223ENST00000552728 KCNH8Q96L42 1107 aa22.01■■□□□ 1.11
WDR90-223ENST00000552728 ARAP1Q96P48 1450 aa22.01■■□□□ 1.11
WDR90-223ENST00000552728 MYT1Q01538 1121 aa21.99■■□□□ 1.11
WDR90-223ENST00000552728 SUPT16HQ9Y5B9 1047 aaKnown RBP21.99■■□□□ 1.11
WDR90-223ENST00000552728 TOP2BQ02880 1626 aa21.93■■□□□ 1.1
WDR90-223ENST00000552728 ATP1B4Q9UN42 357 aaPredicted RBP21.91■■□□□ 1.1
WDR90-223ENST00000552728 BCANQ96GW7 911 aa21.91■■□□□ 1.1
WDR90-223ENST00000552728 PRXQ9BXM0 1461 aa21.9■■□□□ 1.1
WDR90-223ENST00000552728 CLSPNQ9HAW4 1339 aa21.89■■□□□ 1.1
WDR90-223ENST00000552728 CCNB3Q8WWL7 1395 aa21.87■■□□□ 1.09
WDR90-223ENST00000552728 P3H3Q8IVL6 736 aa21.86■■□□□ 1.09
WDR90-223ENST00000552728 HIRIP3Q9BW71 556 aaPredicted RBP21.86■■□□□ 1.09
WDR90-223ENST00000552728 SIN3AQ96ST3 1273 aa21.84■■□□□ 1.09
WDR90-223ENST00000552728 FAM50AQ14320 339 aaKnown RBP21.83■■□□□ 1.09
WDR90-223ENST00000552728 KIF27Q86VH2 1401 aa21.82■■□□□ 1.08
WDR90-223ENST00000552728 DDX10Q13206 875 aaKnown RBP21.81■■□□□ 1.08
WDR90-223ENST00000552728 CUX1P39880 1505 aa21.8■■□□□ 1.08
WDR90-223ENST00000552728 RAB3GAP2Q9H2M9 1393 aa21.8■■□□□ 1.08
WDR90-223ENST00000552728 RRBP1Q9P2E9 1410 aaKnown RBP21.79■■□□□ 1.08
WDR90-223ENST00000552728 ARHGAP35Q9NRY4 1499 aa21.78■■□□□ 1.08
WDR90-223ENST00000552728 ERICH3Q5RHP9 1530 aa21.78■■□□□ 1.08
WDR90-223ENST00000552728 BIVM-ERCC5R4GMW8 1640 aa21.73■■□□□ 1.07
WDR90-223ENST00000552728 TSHZ2Q9NRE2 1034 aa21.73■■□□□ 1.07
WDR90-223ENST00000552728 CUX2O14529 1486 aa21.66■■□□□ 1.06
WDR90-223ENST00000552728 FKBP8Q14318 412 aa21.66■■□□□ 1.06
WDR90-223ENST00000552728 TRIM52Q96A61 297 aa21.64■■□□□ 1.05
WDR90-223ENST00000552728 PHLDB1Q86UU1 1377 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms