Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SHISA7A6NL88 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.17■■■□□ 2.42
SHISA7A6NL88 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.16■■■□□ 2.42
SHISA7A6NL88 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.14■■■□□ 2.42
SHISA7A6NL88 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC30.12■■■□□ 2.41
SHISA7A6NL88 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC30.1■■■□□ 2.41
SHISA7A6NL88 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
SHISA7A6NL88 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.08■■■□□ 2.41
SHISA7A6NL88 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SHISA7A6NL88 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.07■■■□□ 2.4
SHISA7A6NL88 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.05■■■□□ 2.4
SHISA7A6NL88 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SHISA7A6NL88 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.03■■■□□ 2.4
SHISA7A6NL88 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC30.03■■■□□ 2.4
SHISA7A6NL88 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC30.02■■■□□ 2.4
SHISA7A6NL88 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.02■■■□□ 2.4
SHISA7A6NL88 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC29.98■■■□□ 2.39
SHISA7A6NL88 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC29.96■■■□□ 2.39
SHISA7A6NL88 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
SHISA7A6NL88 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
SHISA7A6NL88 RARRES2P7-201ENST00000567349 469 ntBASIC29.86■■■□□ 2.37
SHISA7A6NL88 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC29.85■■■□□ 2.37
SHISA7A6NL88 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC29.85■■■□□ 2.37
SHISA7A6NL88 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC29.83■■■□□ 2.37
SHISA7A6NL88 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
SHISA7A6NL88 AC136428.2-201ENST00000563187 214 ntBASIC29.74■■■□□ 2.35
SHISA7A6NL88 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC29.73■■■□□ 2.35
SHISA7A6NL88 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
SHISA7A6NL88 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
SHISA7A6NL88 AC097358.2-201ENST00000607541 1159 ntBASIC29.71■■■□□ 2.35
SHISA7A6NL88 EBPL-203ENST00000378270 579 ntTSL 2 BASIC29.7■■■□□ 2.35
SHISA7A6NL88 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
SHISA7A6NL88 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
SHISA7A6NL88 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC29.67■■■□□ 2.34
SHISA7A6NL88 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC29.66■■■□□ 2.34
SHISA7A6NL88 SUZ12P1-203ENST00000578195 985 ntBASIC29.63■■■□□ 2.33
SHISA7A6NL88 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SHISA7A6NL88 SETD8P1-201ENST00000623146 1180 ntBASIC29.61■■■□□ 2.33
SHISA7A6NL88 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
SHISA7A6NL88 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC29.56■■■□□ 2.32
SHISA7A6NL88 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.56■■■□□ 2.32
SHISA7A6NL88 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SHISA7A6NL88 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
SHISA7A6NL88 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC29.53■■■□□ 2.32
SHISA7A6NL88 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
SHISA7A6NL88 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC29.53■■■□□ 2.32
SHISA7A6NL88 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29.53■■■□□ 2.32
SHISA7A6NL88 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
SHISA7A6NL88 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SHISA7A6NL88 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC29.48■■■□□ 2.31
SHISA7A6NL88 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC29.48■■■□□ 2.31
SHISA7A6NL88 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
SHISA7A6NL88 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC29.47■■■□□ 2.31
SHISA7A6NL88 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
SHISA7A6NL88 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC29.45■■■□□ 2.3
SHISA7A6NL88 RPS2P35-201ENST00000443417 897 ntBASIC29.44■■■□□ 2.3
SHISA7A6NL88 ILK-212ENST00000532063 1617 ntTSL 2 BASIC29.41■■■□□ 2.3
SHISA7A6NL88 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC29.38■■■□□ 2.29
SHISA7A6NL88 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC29.38■■■□□ 2.29
SHISA7A6NL88 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
SHISA7A6NL88 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC29.32■■■□□ 2.28
SHISA7A6NL88 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC29.32■■■□□ 2.28
SHISA7A6NL88 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC29.29■■■□□ 2.28
SHISA7A6NL88 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
SHISA7A6NL88 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
SHISA7A6NL88 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
SHISA7A6NL88 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC29.25■■■□□ 2.27
SHISA7A6NL88 AC145285.7-201ENST00000614819 1539 ntBASIC29.25■■■□□ 2.27
SHISA7A6NL88 CAHM-201ENST00000604200 896 ntBASIC29.24■■■□□ 2.27
SHISA7A6NL88 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
SHISA7A6NL88 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
SHISA7A6NL88 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC29.17■■■□□ 2.26
SHISA7A6NL88 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
SHISA7A6NL88 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC29.15■■■□□ 2.26
SHISA7A6NL88 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC29.12■■■□□ 2.25
SHISA7A6NL88 NRG1-221ENST00000614767 762 ntTSL 5 BASIC29.11■■■□□ 2.25
SHISA7A6NL88 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
SHISA7A6NL88 MVK-208ENST00000539696 608 ntTSL 5 BASIC29.09■■■□□ 2.25
SHISA7A6NL88 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC29.09■■■□□ 2.25
SHISA7A6NL88 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
SHISA7A6NL88 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
SHISA7A6NL88 AL162393.1-201ENST00000437852 946 ntBASIC29.06■■■□□ 2.24
SHISA7A6NL88 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
SHISA7A6NL88 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC29.05■■■□□ 2.24
SHISA7A6NL88 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
SHISA7A6NL88 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
SHISA7A6NL88 AL391121.1-201ENST00000607967 1349 ntBASIC29.01■■■□□ 2.23
SHISA7A6NL88 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
SHISA7A6NL88 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC29.01■■■□□ 2.23
SHISA7A6NL88 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
SHISA7A6NL88 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
SHISA7A6NL88 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
SHISA7A6NL88 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC28.95■■■□□ 2.23
SHISA7A6NL88 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
SHISA7A6NL88 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
SHISA7A6NL88 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
SHISA7A6NL88 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC28.94■■■□□ 2.22
SHISA7A6NL88 AL133380.1-201ENST00000506013 324 ntBASIC28.94■■■□□ 2.22
SHISA7A6NL88 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
SHISA7A6NL88 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC28.91■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms