Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
TRIM49BA6NDI0 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.8■■■□□ 2.68
TRIM49BA6NDI0 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
TRIM49BA6NDI0 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
TRIM49BA6NDI0 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
TRIM49BA6NDI0 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
TRIM49BA6NDI0 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
TRIM49BA6NDI0 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.76■■■□□ 2.67
TRIM49BA6NDI0 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
TRIM49BA6NDI0 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.69■■■□□ 2.66
TRIM49BA6NDI0 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
TRIM49BA6NDI0 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.68■■■□□ 2.66
TRIM49BA6NDI0 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
TRIM49BA6NDI0 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.66
TRIM49BA6NDI0 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
TRIM49BA6NDI0 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC31.62■■■□□ 2.65
TRIM49BA6NDI0 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC31.62■■■□□ 2.65
TRIM49BA6NDI0 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
TRIM49BA6NDI0 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
TRIM49BA6NDI0 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
TRIM49BA6NDI0 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
TRIM49BA6NDI0 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
TRIM49BA6NDI0 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC31.5■■■□□ 2.63
TRIM49BA6NDI0 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.48■■■□□ 2.63
TRIM49BA6NDI0 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.47■■■□□ 2.63
TRIM49BA6NDI0 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC31.47■■■□□ 2.63
TRIM49BA6NDI0 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.43■■■□□ 2.62
TRIM49BA6NDI0 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC31.41■■■□□ 2.62
TRIM49BA6NDI0 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
TRIM49BA6NDI0 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
TRIM49BA6NDI0 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
TRIM49BA6NDI0 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TRIM49BA6NDI0 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.36■■■□□ 2.61
TRIM49BA6NDI0 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC31.36■■■□□ 2.61
TRIM49BA6NDI0 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
TRIM49BA6NDI0 AC006077.2-201ENST00000623591 457 ntBASIC31.34■■■□□ 2.61
TRIM49BA6NDI0 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
TRIM49BA6NDI0 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.28■■■□□ 2.6
TRIM49BA6NDI0 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
TRIM49BA6NDI0 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
TRIM49BA6NDI0 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
TRIM49BA6NDI0 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.22■■■□□ 2.59
TRIM49BA6NDI0 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
TRIM49BA6NDI0 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
TRIM49BA6NDI0 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
TRIM49BA6NDI0 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
TRIM49BA6NDI0 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.21■■■□□ 2.59
TRIM49BA6NDI0 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC31.21■■■□□ 2.59
TRIM49BA6NDI0 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
TRIM49BA6NDI0 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
TRIM49BA6NDI0 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
TRIM49BA6NDI0 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
TRIM49BA6NDI0 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
TRIM49BA6NDI0 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
TRIM49BA6NDI0 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
TRIM49BA6NDI0 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.15■■■□□ 2.58
TRIM49BA6NDI0 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC31.14■■■□□ 2.58
TRIM49BA6NDI0 ZNRF2P1-201ENST00000441407 443 ntBASIC31.14■■■□□ 2.58
TRIM49BA6NDI0 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
TRIM49BA6NDI0 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC31.09■■■□□ 2.57
TRIM49BA6NDI0 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
TRIM49BA6NDI0 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
TRIM49BA6NDI0 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
TRIM49BA6NDI0 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
TRIM49BA6NDI0 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
TRIM49BA6NDI0 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
TRIM49BA6NDI0 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
TRIM49BA6NDI0 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
TRIM49BA6NDI0 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
TRIM49BA6NDI0 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.01■■■□□ 2.55
TRIM49BA6NDI0 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
TRIM49BA6NDI0 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.99■■■□□ 2.55
TRIM49BA6NDI0 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC30.98■■■□□ 2.55
TRIM49BA6NDI0 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.97■■■□□ 2.55
TRIM49BA6NDI0 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
TRIM49BA6NDI0 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
TRIM49BA6NDI0 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
TRIM49BA6NDI0 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.94■■■□□ 2.54
TRIM49BA6NDI0 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
TRIM49BA6NDI0 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.93■■■□□ 2.54
TRIM49BA6NDI0 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
TRIM49BA6NDI0 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
TRIM49BA6NDI0 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.9■■■□□ 2.54
TRIM49BA6NDI0 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
TRIM49BA6NDI0 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC30.88■■■□□ 2.53
TRIM49BA6NDI0 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
TRIM49BA6NDI0 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.86■■■□□ 2.53
TRIM49BA6NDI0 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC30.84■■■□□ 2.53
TRIM49BA6NDI0 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.83■■■□□ 2.53
TRIM49BA6NDI0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.83■■■□□ 2.53
TRIM49BA6NDI0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.83■■■□□ 2.53
TRIM49BA6NDI0 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
TRIM49BA6NDI0 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
TRIM49BA6NDI0 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.83■■■□□ 2.53
TRIM49BA6NDI0 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.82■■■□□ 2.52
TRIM49BA6NDI0 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.82■■■□□ 2.52
TRIM49BA6NDI0 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.82■■■□□ 2.52
TRIM49BA6NDI0 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
TRIM49BA6NDI0 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
TRIM49BA6NDI0 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms