Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC19.18■□□□□ 0.66
LRCOL1A6NCL2 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.18■□□□□ 0.66
LRCOL1A6NCL2 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LRCOL1A6NCL2 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LRCOL1A6NCL2 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
LRCOL1A6NCL2 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC19.16■□□□□ 0.66
LRCOL1A6NCL2 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRCOL1A6NCL2 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRCOL1A6NCL2 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
LRCOL1A6NCL2 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LRCOL1A6NCL2 AL031258.1-201ENST00000623562 325 ntBASIC19.07■□□□□ 0.64
LRCOL1A6NCL2 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRCOL1A6NCL2 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC19.06■□□□□ 0.64
LRCOL1A6NCL2 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.06■□□□□ 0.64
LRCOL1A6NCL2 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRCOL1A6NCL2 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRCOL1A6NCL2 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRCOL1A6NCL2 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRCOL1A6NCL2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRCOL1A6NCL2 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
LRCOL1A6NCL2 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRCOL1A6NCL2 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRCOL1A6NCL2 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRCOL1A6NCL2 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC19■□□□□ 0.63
LRCOL1A6NCL2 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19■□□□□ 0.63
LRCOL1A6NCL2 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRCOL1A6NCL2 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRCOL1A6NCL2 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRCOL1A6NCL2 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRCOL1A6NCL2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC18.96■□□□□ 0.63
LRCOL1A6NCL2 AC145285.7-201ENST00000614819 1539 ntBASIC18.95■□□□□ 0.62
LRCOL1A6NCL2 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRCOL1A6NCL2 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRCOL1A6NCL2 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRCOL1A6NCL2 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRCOL1A6NCL2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC18.91■□□□□ 0.62
LRCOL1A6NCL2 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC18.9■□□□□ 0.62
LRCOL1A6NCL2 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC18.9■□□□□ 0.62
LRCOL1A6NCL2 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC18.9■□□□□ 0.62
LRCOL1A6NCL2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LRCOL1A6NCL2 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC18.88■□□□□ 0.61
LRCOL1A6NCL2 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LRCOL1A6NCL2 EBPL-203ENST00000378270 579 ntTSL 2 BASIC18.86■□□□□ 0.61
LRCOL1A6NCL2 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRCOL1A6NCL2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LRCOL1A6NCL2 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LRCOL1A6NCL2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRCOL1A6NCL2 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRCOL1A6NCL2 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRCOL1A6NCL2 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRCOL1A6NCL2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC18.8■□□□□ 0.6
LRCOL1A6NCL2 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC18.79■□□□□ 0.6
LRCOL1A6NCL2 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC18.78■□□□□ 0.6
LRCOL1A6NCL2 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC18.78■□□□□ 0.6
LRCOL1A6NCL2 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRCOL1A6NCL2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC18.76■□□□□ 0.59
LRCOL1A6NCL2 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
LRCOL1A6NCL2 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRCOL1A6NCL2 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRCOL1A6NCL2 MVK-208ENST00000539696 608 ntTSL 5 BASIC18.71■□□□□ 0.59
LRCOL1A6NCL2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
LRCOL1A6NCL2 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
LRCOL1A6NCL2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRCOL1A6NCL2 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRCOL1A6NCL2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRCOL1A6NCL2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC18.66■□□□□ 0.58
LRCOL1A6NCL2 RARRES2P7-201ENST00000567349 469 ntBASIC18.66■□□□□ 0.58
LRCOL1A6NCL2 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRCOL1A6NCL2 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRCOL1A6NCL2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC18.65■□□□□ 0.58
LRCOL1A6NCL2 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LRCOL1A6NCL2 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRCOL1A6NCL2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
LRCOL1A6NCL2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRCOL1A6NCL2 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC18.64■□□□□ 0.57
LRCOL1A6NCL2 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRCOL1A6NCL2 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
LRCOL1A6NCL2 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRCOL1A6NCL2 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LRCOL1A6NCL2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRCOL1A6NCL2 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC18.61■□□□□ 0.57
LRCOL1A6NCL2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC18.61■□□□□ 0.57
LRCOL1A6NCL2 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.6■□□□□ 0.57
LRCOL1A6NCL2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC18.58■□□□□ 0.56
LRCOL1A6NCL2 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRCOL1A6NCL2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC18.57■□□□□ 0.56
LRCOL1A6NCL2 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRCOL1A6NCL2 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC18.56■□□□□ 0.56
LRCOL1A6NCL2 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRCOL1A6NCL2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LRCOL1A6NCL2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC18.56■□□□□ 0.56
LRCOL1A6NCL2 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRCOL1A6NCL2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC18.54■□□□□ 0.56
LRCOL1A6NCL2 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
LRCOL1A6NCL2 SETD8P1-201ENST00000623146 1180 ntBASIC18.53■□□□□ 0.56
LRCOL1A6NCL2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRCOL1A6NCL2 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRCOL1A6NCL2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LRCOL1A6NCL2 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LRCOL1A6NCL2 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms