Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV27A0A0K0K1C4 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBV27A0A0K0K1C4 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBV27A0A0K0K1C4 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV27A0A0K0K1C4 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TRBV27A0A0K0K1C4 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRBV27A0A0K0K1C4 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRBV27A0A0K0K1C4 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRBV27A0A0K0K1C4 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV27A0A0K0K1C4 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC20.43■□□□□ 0.86
TRBV27A0A0K0K1C4 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRBV27A0A0K0K1C4 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC20.43■□□□□ 0.86
TRBV27A0A0K0K1C4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TRBV27A0A0K0K1C4 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
TRBV27A0A0K0K1C4 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TRBV27A0A0K0K1C4 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV27A0A0K0K1C4 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TRBV27A0A0K0K1C4 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
TRBV27A0A0K0K1C4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TRBV27A0A0K0K1C4 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TRBV27A0A0K0K1C4 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRBV27A0A0K0K1C4 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC20.3■□□□□ 0.84
TRBV27A0A0K0K1C4 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRBV27A0A0K0K1C4 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
TRBV27A0A0K0K1C4 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TRBV27A0A0K0K1C4 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRBV27A0A0K0K1C4 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRBV27A0A0K0K1C4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TRBV27A0A0K0K1C4 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRBV27A0A0K0K1C4 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRBV27A0A0K0K1C4 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRBV27A0A0K0K1C4 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TRBV27A0A0K0K1C4 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TRBV27A0A0K0K1C4 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRBV27A0A0K0K1C4 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRBV27A0A0K0K1C4 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRBV27A0A0K0K1C4 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC20.19■□□□□ 0.82
TRBV27A0A0K0K1C4 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.18■□□□□ 0.82
TRBV27A0A0K0K1C4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TRBV27A0A0K0K1C4 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC20.16■□□□□ 0.82
TRBV27A0A0K0K1C4 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV27A0A0K0K1C4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV27A0A0K0K1C4 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV27A0A0K0K1C4 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRBV27A0A0K0K1C4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRBV27A0A0K0K1C4 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRBV27A0A0K0K1C4 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV27A0A0K0K1C4 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRBV27A0A0K0K1C4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRBV27A0A0K0K1C4 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRBV27A0A0K0K1C4 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.1■□□□□ 0.81
TRBV27A0A0K0K1C4 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRBV27A0A0K0K1C4 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRBV27A0A0K0K1C4 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRBV27A0A0K0K1C4 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRBV27A0A0K0K1C4 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRBV27A0A0K0K1C4 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRBV27A0A0K0K1C4 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRBV27A0A0K0K1C4 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV27A0A0K0K1C4 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
TRBV27A0A0K0K1C4 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRBV27A0A0K0K1C4 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRBV27A0A0K0K1C4 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRBV27A0A0K0K1C4 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV27A0A0K0K1C4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV27A0A0K0K1C4 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRBV27A0A0K0K1C4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TRBV27A0A0K0K1C4 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRBV27A0A0K0K1C4 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.02■□□□□ 0.79
TRBV27A0A0K0K1C4 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TRBV27A0A0K0K1C4 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV27A0A0K0K1C4 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRBV27A0A0K0K1C4 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV27A0A0K0K1C4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV27A0A0K0K1C4 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV27A0A0K0K1C4 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC19.95■□□□□ 0.78
TRBV27A0A0K0K1C4 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC19.94■□□□□ 0.78
TRBV27A0A0K0K1C4 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV27A0A0K0K1C4 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV27A0A0K0K1C4 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV27A0A0K0K1C4 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV27A0A0K0K1C4 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC19.9■□□□□ 0.78
TRBV27A0A0K0K1C4 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV27A0A0K0K1C4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV27A0A0K0K1C4 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV27A0A0K0K1C4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRBV27A0A0K0K1C4 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TRBV27A0A0K0K1C4 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.85■□□□□ 0.77
TRBV27A0A0K0K1C4 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC19.83■□□□□ 0.77
TRBV27A0A0K0K1C4 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRBV27A0A0K0K1C4 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRBV27A0A0K0K1C4 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRBV27A0A0K0K1C4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV27A0A0K0K1C4 INO80B-203ENST00000409917 796 ntTSL 2 BASIC19.82■□□□□ 0.76
TRBV27A0A0K0K1C4 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC19.8■□□□□ 0.76
TRBV27A0A0K0K1C4 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC19.79■□□□□ 0.76
TRBV27A0A0K0K1C4 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV27A0A0K0K1C4 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV27A0A0K0K1C4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV27A0A0K0K1C4 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms