Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRBV6-8A0A0A6YYG3 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV6-8A0A0A6YYG3 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV6-8A0A0A6YYG3 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRBV6-8A0A0A6YYG3 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRBV6-8A0A0A6YYG3 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC19.96■□□□□ 0.79
TRBV6-8A0A0A6YYG3 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
TRBV6-8A0A0A6YYG3 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV6-8A0A0A6YYG3 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV6-8A0A0A6YYG3 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV6-8A0A0A6YYG3 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV6-8A0A0A6YYG3 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV6-8A0A0A6YYG3 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV6-8A0A0A6YYG3 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV6-8A0A0A6YYG3 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRBV6-8A0A0A6YYG3 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV6-8A0A0A6YYG3 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRBV6-8A0A0A6YYG3 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
TRBV6-8A0A0A6YYG3 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC19.82■□□□□ 0.76
TRBV6-8A0A0A6YYG3 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV6-8A0A0A6YYG3 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV6-8A0A0A6YYG3 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV6-8A0A0A6YYG3 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC19.74■□□□□ 0.75
TRBV6-8A0A0A6YYG3 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV6-8A0A0A6YYG3 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC19.72■□□□□ 0.75
TRBV6-8A0A0A6YYG3 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
TRBV6-8A0A0A6YYG3 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC19.71■□□□□ 0.75
TRBV6-8A0A0A6YYG3 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV6-8A0A0A6YYG3 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV6-8A0A0A6YYG3 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV6-8A0A0A6YYG3 AC006077.2-201ENST00000623591 457 ntBASIC19.67■□□□□ 0.74
TRBV6-8A0A0A6YYG3 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV6-8A0A0A6YYG3 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
TRBV6-8A0A0A6YYG3 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV6-8A0A0A6YYG3 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV6-8A0A0A6YYG3 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.64■□□□□ 0.73
TRBV6-8A0A0A6YYG3 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
TRBV6-8A0A0A6YYG3 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TRBV6-8A0A0A6YYG3 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV6-8A0A0A6YYG3 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV6-8A0A0A6YYG3 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
TRBV6-8A0A0A6YYG3 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC19.6■□□□□ 0.73
TRBV6-8A0A0A6YYG3 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC19.6■□□□□ 0.73
TRBV6-8A0A0A6YYG3 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV6-8A0A0A6YYG3 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV6-8A0A0A6YYG3 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV6-8A0A0A6YYG3 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV6-8A0A0A6YYG3 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV6-8A0A0A6YYG3 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV6-8A0A0A6YYG3 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV6-8A0A0A6YYG3 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV6-8A0A0A6YYG3 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV6-8A0A0A6YYG3 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV6-8A0A0A6YYG3 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV6-8A0A0A6YYG3 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV6-8A0A0A6YYG3 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC19.54■□□□□ 0.72
TRBV6-8A0A0A6YYG3 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV6-8A0A0A6YYG3 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV6-8A0A0A6YYG3 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV6-8A0A0A6YYG3 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV6-8A0A0A6YYG3 ZNRF2P1-201ENST00000441407 443 ntBASIC19.5■□□□□ 0.71
TRBV6-8A0A0A6YYG3 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.49■□□□□ 0.71
TRBV6-8A0A0A6YYG3 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV6-8A0A0A6YYG3 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV6-8A0A0A6YYG3 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV6-8A0A0A6YYG3 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRBV6-8A0A0A6YYG3 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC19.45■□□□□ 0.7
TRBV6-8A0A0A6YYG3 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC19.45■□□□□ 0.7
TRBV6-8A0A0A6YYG3 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC19.45■□□□□ 0.7
TRBV6-8A0A0A6YYG3 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV6-8A0A0A6YYG3 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC19.43■□□□□ 0.7
TRBV6-8A0A0A6YYG3 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC19.43■□□□□ 0.7
TRBV6-8A0A0A6YYG3 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV6-8A0A0A6YYG3 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TRBV6-8A0A0A6YYG3 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC19.41■□□□□ 0.7
TRBV6-8A0A0A6YYG3 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV6-8A0A0A6YYG3 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRBV6-8A0A0A6YYG3 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TRBV6-8A0A0A6YYG3 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC19.39■□□□□ 0.69
TRBV6-8A0A0A6YYG3 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRBV6-8A0A0A6YYG3 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV6-8A0A0A6YYG3 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TRBV6-8A0A0A6YYG3 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC19.37■□□□□ 0.69
TRBV6-8A0A0A6YYG3 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.36■□□□□ 0.69
TRBV6-8A0A0A6YYG3 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV6-8A0A0A6YYG3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV6-8A0A0A6YYG3 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TRBV6-8A0A0A6YYG3 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV6-8A0A0A6YYG3 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV6-8A0A0A6YYG3 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TRBV6-8A0A0A6YYG3 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV6-8A0A0A6YYG3 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRBV6-8A0A0A6YYG3 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TRBV6-8A0A0A6YYG3 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
TRBV6-8A0A0A6YYG3 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV6-8A0A0A6YYG3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.31■□□□□ 0.68
TRBV6-8A0A0A6YYG3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.31■□□□□ 0.68
TRBV6-8A0A0A6YYG3 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.31■□□□□ 0.68
TRBV6-8A0A0A6YYG3 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRBV6-8A0A0A6YYG3 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms