Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PARPBPQ9NWS1 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PARPBPQ9NWS1 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.39□□□□□ -0.11
PARPBPQ9NWS1 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 AC006449.5-201ENST00000610658 2098 ntBASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 AL139400.1-201ENST00000366220 510 ntBASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 AL645939.2-201ENST00000427340 991 ntBASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 FAM86GP-201ENST00000448322 971 ntBASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 AL139010.1-201ENST00000454878 894 ntBASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 AC007967.4-201ENST00000614700 386 ntBASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 TUBB3P1-201ENST00000405796 1332 ntBASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PARPBPQ9NWS1 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 LINC02199-201ENST00000506655 2702 ntBASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 CYP2T1P-202ENST00000641596 2535 ntBASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.37□□□□□ -0.11
PARPBPQ9NWS1 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms