Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 RPS2P28-201ENST00000314255 741 ntBASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 HCG4P8-203ENST00000443049 980 ntBASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 AC108073.2-201ENST00000464002 357 ntBASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 RNPS1P1-201ENST00000507437 918 ntBASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 MIR4321-201ENST00000592276 80 ntBASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 CLEC4GP1-201ENST00000596555 870 ntBASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 AC090616.6-203ENST00000579186 1945 ntBASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CTNNBIP1Q9NSA3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
CTNNBIP1Q9NSA3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.02□□□□□ -0.32
CTNNBIP1Q9NSA3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CTNNBIP1Q9NSA3 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
CTNNBIP1Q9NSA3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.02□□□□□ -0.32
CTNNBIP1Q9NSA3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
CTNNBIP1Q9NSA3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CTNNBIP1Q9NSA3 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
CTNNBIP1Q9NSA3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CTNNBIP1Q9NSA3 AL136379.1-201ENST00000623471 2642 ntBASIC13.02□□□□□ -0.32
CTNNBIP1Q9NSA3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CTNNBIP1Q9NSA3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 PRSS29P-201ENST00000440800 595 ntBASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 KRT18P35-201ENST00000510488 1269 ntBASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CTNNBIP1Q9NSA3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CTNNBIP1Q9NSA3 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CTNNBIP1Q9NSA3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CTNNBIP1Q9NSA3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.01□□□□□ -0.33
CTNNBIP1Q9NSA3 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CTNNBIP1Q9NSA3 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CTNNBIP1Q9NSA3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.01□□□□□ -0.33
CTNNBIP1Q9NSA3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CTNNBIP1Q9NSA3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.01□□□□□ -0.33
CTNNBIP1Q9NSA3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.01□□□□□ -0.33
CTNNBIP1Q9NSA3 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CTNNBIP1Q9NSA3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.01□□□□□ -0.33
CTNNBIP1Q9NSA3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.01□□□□□ -0.33
CTNNBIP1Q9NSA3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CTNNBIP1Q9NSA3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CTNNBIP1Q9NSA3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CTNNBIP1Q9NSA3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.01□□□□□ -0.33
CTNNBIP1Q9NSA3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.01□□□□□ -0.33
CTNNBIP1Q9NSA3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
CTNNBIP1Q9NSA3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CTNNBIP1Q9NSA3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CTNNBIP1Q9NSA3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CTNNBIP1Q9NSA3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms