Protein–RNA interactions for Protein: Q9NPA1

KCNMB3, Calcium-activated potassium channel subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3Q9NPA1 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 LINC02560-201ENST00000596379 459 ntBASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 AL391069.4-201ENST00000609583 481 ntBASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 AC009118.2-201ENST00000613275 655 ntBASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
KCNMB3Q9NPA1 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
KCNMB3Q9NPA1 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.45
KCNMB3Q9NPA1 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KCNMB3Q9NPA1 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
KCNMB3Q9NPA1 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
KCNMB3Q9NPA1 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.83■□□□□ 0.45
KCNMB3Q9NPA1 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.83■□□□□ 0.45
KCNMB3Q9NPA1 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KCNMB3Q9NPA1 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KCNMB3Q9NPA1 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
KCNMB3Q9NPA1 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
KCNMB3Q9NPA1 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KCNMB3Q9NPA1 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
KCNMB3Q9NPA1 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
KCNMB3Q9NPA1 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KCNMB3Q9NPA1 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
KCNMB3Q9NPA1 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
KCNMB3Q9NPA1 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.83■□□□□ 0.44
KCNMB3Q9NPA1 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KCNMB3Q9NPA1 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KCNMB3Q9NPA1 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.83■□□□□ 0.44
KCNMB3Q9NPA1 AC236430.1-201ENST00000402231 743 ntBASIC17.83■□□□□ 0.44
KCNMB3Q9NPA1 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
KCNMB3Q9NPA1 TOMM22P5-201ENST00000416399 439 ntBASIC17.83■□□□□ 0.44
KCNMB3Q9NPA1 AC015922.1-201ENST00000421102 1152 ntBASIC17.83■□□□□ 0.44
KCNMB3Q9NPA1 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.83■□□□□ 0.44
KCNMB3Q9NPA1 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KCNMB3Q9NPA1 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KCNMB3Q9NPA1 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KCNMB3Q9NPA1 AC008761.3-201ENST00000624803 892 ntBASIC17.83■□□□□ 0.44
KCNMB3Q9NPA1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KCNMB3Q9NPA1 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KCNMB3Q9NPA1 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.83■□□□□ 0.44
KCNMB3Q9NPA1 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.83■□□□□ 0.44
KCNMB3Q9NPA1 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
KCNMB3Q9NPA1 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KCNMB3Q9NPA1 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
KCNMB3Q9NPA1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KCNMB3Q9NPA1 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.82■□□□□ 0.44
KCNMB3Q9NPA1 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
KCNMB3Q9NPA1 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KCNMB3Q9NPA1 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.82■□□□□ 0.44
KCNMB3Q9NPA1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.82■□□□□ 0.44
KCNMB3Q9NPA1 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KCNMB3Q9NPA1 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KCNMB3Q9NPA1 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.82■□□□□ 0.44
KCNMB3Q9NPA1 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KCNMB3Q9NPA1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KCNMB3Q9NPA1 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KCNMB3Q9NPA1 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.82■□□□□ 0.44
KCNMB3Q9NPA1 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KCNMB3Q9NPA1 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KCNMB3Q9NPA1 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
KCNMB3Q9NPA1 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KCNMB3Q9NPA1 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KCNMB3Q9NPA1 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.82■□□□□ 0.44
KCNMB3Q9NPA1 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KCNMB3Q9NPA1 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.82■□□□□ 0.44
KCNMB3Q9NPA1 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
KCNMB3Q9NPA1 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.82■□□□□ 0.44
KCNMB3Q9NPA1 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.82■□□□□ 0.44
KCNMB3Q9NPA1 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
KCNMB3Q9NPA1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms