Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NKX6-2Q9C056 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
NKX6-2Q9C056 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
NKX6-2Q9C056 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.02□□□□□ -0.32
NKX6-2Q9C056 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.02□□□□□ -0.32
NKX6-2Q9C056 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NKX6-2Q9C056 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
NKX6-2Q9C056 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.02□□□□□ -0.32
NKX6-2Q9C056 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
NKX6-2Q9C056 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
NKX6-2Q9C056 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
NKX6-2Q9C056 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.02□□□□□ -0.32
NKX6-2Q9C056 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
NKX6-2Q9C056 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 MIR718-201ENST00000390190 70 ntBASIC13.02□□□□□ -0.33
NKX6-2Q9C056 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 FAM87A-204ENST00000613235 858 ntBASIC13.02□□□□□ -0.33
NKX6-2Q9C056 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 AC079602.3-201ENST00000623931 403 ntBASIC13.02□□□□□ -0.33
NKX6-2Q9C056 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 AC089987.1-201ENST00000551654 2209 ntBASIC13.02□□□□□ -0.33
NKX6-2Q9C056 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 AC008677.1-201ENST00000519230 1561 ntBASIC13.02□□□□□ -0.33
NKX6-2Q9C056 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NKX6-2Q9C056 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 AC003669.1-201ENST00000334569 611 ntBASIC13.01□□□□□ -0.33
NKX6-2Q9C056 INGX-201ENST00000359239 846 ntBASIC13.01□□□□□ -0.33
NKX6-2Q9C056 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 FAM220CP-201ENST00000395253 831 ntBASIC13.01□□□□□ -0.33
NKX6-2Q9C056 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC13.01□□□□□ -0.33
NKX6-2Q9C056 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms