Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BBS4Q96RK4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.22■□□□□ 0.03
BBS4Q96RK4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BBS4Q96RK4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BBS4Q96RK4 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.22■□□□□ 0.03
BBS4Q96RK4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BBS4Q96RK4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BBS4Q96RK4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
BBS4Q96RK4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.22■□□□□ 0.03
BBS4Q96RK4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.22■□□□□ 0.03
BBS4Q96RK4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.22■□□□□ 0.03
BBS4Q96RK4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.22■□□□□ 0.03
BBS4Q96RK4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.22■□□□□ 0.03
BBS4Q96RK4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.22■□□□□ 0.03
BBS4Q96RK4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.22■□□□□ 0.03
BBS4Q96RK4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.22■□□□□ 0.03
BBS4Q96RK4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.22■□□□□ 0.03
BBS4Q96RK4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.22■□□□□ 0.03
BBS4Q96RK4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.22■□□□□ 0.03
BBS4Q96RK4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.22■□□□□ 0.03
BBS4Q96RK4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BBS4Q96RK4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.22■□□□□ 0.03
BBS4Q96RK4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.22■□□□□ 0.03
BBS4Q96RK4 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.22■□□□□ 0.03
BBS4Q96RK4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BBS4Q96RK4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.22■□□□□ 0.03
BBS4Q96RK4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
BBS4Q96RK4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.22■□□□□ 0.03
BBS4Q96RK4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BBS4Q96RK4 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.22■□□□□ 0.03
BBS4Q96RK4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BBS4Q96RK4 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.22■□□□□ 0.03
BBS4Q96RK4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BBS4Q96RK4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BBS4Q96RK4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.22■□□□□ 0.03
BBS4Q96RK4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
BBS4Q96RK4 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BBS4Q96RK4 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
BBS4Q96RK4 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
BBS4Q96RK4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BBS4Q96RK4 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.21■□□□□ 0.03
BBS4Q96RK4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.21■□□□□ 0.03
BBS4Q96RK4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BBS4Q96RK4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BBS4Q96RK4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
BBS4Q96RK4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.21■□□□□ 0.03
BBS4Q96RK4 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BBS4Q96RK4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
BBS4Q96RK4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
BBS4Q96RK4 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
BBS4Q96RK4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
BBS4Q96RK4 MIR346-201ENST00000362234 95 ntBASIC15.21■□□□□ 0.03
BBS4Q96RK4 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BBS4Q96RK4 FAM220BP-201ENST00000377689 816 ntBASIC15.21■□□□□ 0.03
BBS4Q96RK4 HLA-H-201ENST00000383620 1096 ntBASIC15.21■□□□□ 0.03
BBS4Q96RK4 AC005237.2-201ENST00000434368 219 ntBASIC15.21■□□□□ 0.03
BBS4Q96RK4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.21■□□□□ 0.03
BBS4Q96RK4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BBS4Q96RK4 LINC01225-203ENST00000563550 1244 ntBASIC15.21■□□□□ 0.03
BBS4Q96RK4 AC061975.2-201ENST00000581722 295 ntBASIC15.21■□□□□ 0.03
BBS4Q96RK4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.21■□□□□ 0.03
BBS4Q96RK4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.21■□□□□ 0.03
BBS4Q96RK4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.21■□□□□ 0.03
BBS4Q96RK4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
BBS4Q96RK4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
BBS4Q96RK4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.21■□□□□ 0.03
BBS4Q96RK4 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BBS4Q96RK4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.21■□□□□ 0.03
BBS4Q96RK4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BBS4Q96RK4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
BBS4Q96RK4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BBS4Q96RK4 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BBS4Q96RK4 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
BBS4Q96RK4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
BBS4Q96RK4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
BBS4Q96RK4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
BBS4Q96RK4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.21■□□□□ 0.02
BBS4Q96RK4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
BBS4Q96RK4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
BBS4Q96RK4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
BBS4Q96RK4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
BBS4Q96RK4 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
BBS4Q96RK4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.21■□□□□ 0.02
BBS4Q96RK4 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
BBS4Q96RK4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
BBS4Q96RK4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BBS4Q96RK4 AC105917.1-201ENST00000506637 2539 ntBASIC15.2■□□□□ 0.02
BBS4Q96RK4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BBS4Q96RK4 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
BBS4Q96RK4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
BBS4Q96RK4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
BBS4Q96RK4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.2■□□□□ 0.02
BBS4Q96RK4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BBS4Q96RK4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.2■□□□□ 0.02
BBS4Q96RK4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.2■□□□□ 0.02
BBS4Q96RK4 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
BBS4Q96RK4 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BBS4Q96RK4 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
BBS4Q96RK4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BBS4Q96RK4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms